Achromobacter xylosoxidans NH44784-1996: NH44784_032401
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Entry
NH44784_032401 CDS
T02785
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
axo
Achromobacter xylosoxidans NH44784-1996
Pathway
axo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
axo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NH44784_032401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axo03021
]
NH44784_032401
Transcription machinery [BR:
axo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NH44784_032401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
HTH_28
DUF4824
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CCH07200
LinkDB
All DBs
Position
3478674..3479195
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AA seq
173 aa
AA seq
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MSSTDTLPTDTVTQIYREHHGWLSAWLRKKLGNSFDAADLAHDTFLRLMAARVRAGGGDE
PRALLTHIAKGLVVDHWRRRALEDAYQAAAAQLPAREVPSPEVRALILETLYAIDATLRT
LPAKTREIFLLSQFDGMAYADIARAQRVSLATVKRHMQKALTACLIAYQAGPA
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcgaccgataccctgcccaccgacaccgtcacgcagatctaccgcgagcaccat
ggctggctgtcggcctggctgcgcaagaagctcggcaattccttcgatgcggccgacctc
gcccacgacacgttcctgcgtctgatggcggcgcgcgtgagggcaggcggcggcgacgag
ccgcgcgcgctcctcacgcacatcgccaaggggctggtggtggatcactggcgccgccgc
gcgctggaggacgcctatcaagccgccgcggcgcagctgccggcgcgcgaggtgccgtcg
cccgaggtgcgggcgctgatcctggaaaccctgtacgcgatcgatgccaccctgcgcacc
ctgccggccaagacccgcgagatcttcctgttgtcgcagttcgacggcatggcgtatgcc
gacatcgcgcgcgcgcaacgcgtatcgctggccacggtcaagcgccacatgcagaaggcg
ctgacggcctgcctgatcgcctaccaggcgggtcccgcatga
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