Aster yellows witches'-broom phytoplasma AYWB: AYWB_399
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Entry
AYWB_399 CDS
T00314
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ayw
Aster yellows witches'-broom phytoplasma AYWB
Pathway
ayw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ayw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AYWB_399 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ayw03400
]
AYWB_399 (uvrB)
DNA repair and recombination proteins [BR:
ayw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYWB_399 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AYWB_399 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_7
AAA_19
UB2H
AAA_30
P-loop_SecA
AAA_22
AAA_5
AAA
AAA_16
Pannexin_like
FPRL1_inhibitor
CbiA
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABC65516
UniProt:
Q2NJ77
LinkDB
All DBs
Position
410082..412085
Genome browser
AA seq
667 aa
AA seq
DB search
MSLTNLFKLQSSLKPSGDQPQAIQKLVNNFKQGLKEQILLGATGTGKTFTIANIIQHLQQ
KTLVIAHNKTLAGQLYNELKAMFPNNRVEYFISYYDYYQPEAYVASSDTYIEKDSKINDE
IDQLRHSAAGSLINRDDVIVVASVSCIYGVGDLKDYQKSTLHLQIGDKYERKNLINKLIE
LKYQRNEINFQRGTFRVRGDIIEIIASSSKEIGIRIIFFGNEIENIQNFYVLNGKAIANL
KLITLFPASLYATNNQKLQESIKRIRQELKEQINHFEKTNQLLAAQKIKMRTLHDLEMLE
QIGNCNGVENYSRHLALKGKGEAPSTLIDFFGNDFLTIVDESHVTIPQIKGMYFGDFSRK
NNLVNFGFRLPSALDNRPLKFNEFQEKMNKVIYLSATPGDYELTKKIPIVEQIIRPTFVL
DPEIEVRPTNNQMDDLYFEIKHQTKNNQRILITTLTINMSEDLTTYLKNLGIKVAYLHSE
IKSLQRLEILKDLRLGKYDCLVGVNLLREGLDLPEVALVAILDADKQGFLRNERSLIQTI
GRAARNITGKAIMYADCISPAMQIAIEETYRRRKIQKQYNETMKVTPTALNKTILETISI
KQKERIKNEKGKSKVQKKLQINTNMTAKNKEIKRLQKTMKEAAKALDFEKAATLRDLILD
LEKKEKR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaacaaatttatttaaattgcaaagttctttaaaaccaagtggcgaccaacct
caagcaattcaaaaattagttaataactttaaacaaggtttaaaagaacaaattcttttg
ggagctactggcactggaaaaacttttaccattgcaaatattattcaacatttacaacaa
aaaactttggttattgctcataataaaacattagcaggacagctttacaacgaattaaaa
gccatgtttcccaacaatcgagtagaatattttatttcttattatgattactaccaacca
gaagcatatgtagcatcaagcgacacttacatcgaaaaagactccaaaatcaatgatgaa
attgatcagttgcgtcatagtgccgcaggttcgttaattaaccgagatgatgtaattgta
gttgcttctgtttcgtgcatttatggagtaggtgaccttaaagattatcaaaaatcaaca
ctacatttacaaattggagataagtacgaaagaaaaaatttaattaacaagttaatagaa
ttaaaataccaaagaaacgaaattaattttcaaagaggcacttttcgagtaagaggcgac
attatagaaattattgcttcatctagcaaagaaattggtatccgcattattttttttggc
aatgaaattgaaaatattcaaaatttttatgttttaaatggcaaagcaattgctaacctt
aaattaattactcttttccctgctagtctatatgctacaaataaccaaaaattacaagaa
agcatcaaaagaattcgccaagaattaaaggaacaaattaatcattttgaaaaaactaac
caacttttagcagctcaaaaaattaaaatgcgtactttacacgatttagaaatgttagaa
caaataggcaattgcaatggtgttgaaaattattcaagacacttggcactcaaaggaaaa
ggcgaggcgccatccactttaattgatttttttggaaatgattttttaaccattgttgat
gaatctcatgtaactataccccaaattaaaggaatgtattttggtgatttttctcgcaaa
aacaacttagtaaatttcggtttcagactaccaagcgcccttgataacagacctttaaaa
ttcaatgaattccaagagaaaatgaataaagttatctatctttcagctactcctggagac
tatgaattaactaaaaaaatccccattgtagaacaaattataagacctacttttgttctt
gatccagaaattgaagtgagacccaccaacaaccaaatggacgatctttactttgaaatt
aaacaccaaactaaaaacaatcaaagaattttgataacaactttaactattaatatgagc
gaagacctaactacttatttaaaaaatttaggcatcaaagtagcttatttacatagtgaa
attaaatctttgcaaagacttgaaattttaaaagatctaagattgggaaaatacgattgt
ttggtgggagttaatcttttgagagaaggacttgacttacctgaagtagctttagtagct
attttggatgctgataaacaaggttttttaagaaacgaaagaagccttatccaaactatt
ggaagagcagctagaaacattacaggaaaagctattatgtatgctgattgtatttctcct
gctatgcaaattgccattgaagaaacttatcgtagaagaaaaatccaaaaacaatacaac
gaaacaatgaaagtaacaccaactgctcttaacaaaactattttagaaacaatttcaata
aaacaaaaagaaaggatcaaaaatgaaaagggtaagagtaaggtgcaaaaaaagttgcaa
ataaatacaaatatgacagctaaaaataaagaaattaaacgtttacaaaaaacgatgaaa
gaagctgccaaagcccttgattttgaaaaagcagctacattaagagatttgattttagat
ttggagaaaaaagaaaaaagataa
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