Azoarcus sp. DN11: CDA09_00195 Help Entry CDA09_00195       CDS       T05691                                  Name (GenBank) excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism azd  Azoarcus sp. DN11 Pathway azd03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:azd00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     CDA09_00195  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:azd03400]     CDA09_00195 DNA repair and recombination proteins [BR:azd03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      CDA09_00195   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       CDA09_00195 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ABC_tran UvrA_inter AAA_29 UvrA_DNA-bind nSTAND1 AAA_16 SMC_N RsgA_GTPase AAA_21 AAA_25 Viral_helicase1 AAA_33 AAA_22 NACHT AAA_23 nSTAND3 ATPase DnaJ_CXXCXGXG DUF4350 Anti-TRAP ArfGap Motif Other DBs NCBI-ProteinID:  AYH41819 LinkDB All DBs Position 43261..48999 Genome browser AA seq 1912 aa AA seqDB search MSDRIRIFGARQNNLKNLSLDIALNELTVVTGVSGSGKSSLVFDTLYAEGQRRYVETFSP YARQFLDRMDKPQVDRIEGVPPAIAIDQTNPVRTSRSTVGTMTELTDHFKLLYARASKLY CRGCGQEVRRDDPDSVHAALAERCAADDPRLVLTFAVPVPKNFTEDEVTQLLNQQGYTRI HSRDSGNGGDVLNVVQDRFRFSNAERSRVIEAVETAMTHGHGRLAVRAQGEGGETVWRFS RDLHCADCDIHYSDPTPGLFSFNSPIGACDTCRGFGRVIGVDFSLVIPDESKTLAEGAVK PWQTASYRECQDDLAKMAKKYGVAMDVPFRDLPPEHRQWLLEGDPEWKSWEASWPRKWYG VRHFFDWLETKAYKMHIRVLLSRYRSYTECPACKGARLKPEALLWRLGEKAATETAQANE NTPQGAADAGAFGARRPPRVQRAPEAPVAAADRSPHLAAEKPGLAIHELMAHPVSRVRDF IARVELPSGLDEATELLLGEIRSRLDYLANVGLAYLTLDRQSRTLSGGEVQRINLTTALG TSLVNTLFVLDEPSIGLHPRDIDRILAVMTRLRDAGNTLVVVEHDPQLMSAADRLLDIGP GPGERGGQIVAYAPPAQLAADPASLTGAYLAGKKRVDAGRRPRPVDKADPVLRLVGAREH NLRELDIDIPLGKLVCVSGVSGSGKSTLIQDVLYPALAKHFGHGTEAPGAFARLEGLEQI SGVVMVDQSAIGKSARSNPVSYVGAWDAIRALFAALPEAKTRGYTPGTFSFNSGTGRCPT CTGSGFEHVEMQFLSDVYLRCPDCDGKRYRSEVLELQWRDRSVSDVLDMTVSEALAFFAD QPAVQAALAPLADVGLEYLKLGQPVPTLSGGEAQRLKLAGHLAEAAKLSGKKSRTKSQSG RLLFLFDEPTTGLHFEDVATLLRAFEKLLDAGHALVVIEHNLDVLLAADWLIDLGPEGGE DGGELVVAGTPHTVMGCAASHTGIAMRAYADSLGKPTAAVAEPVARYRAMAAPAIEIRHA REHNLKNVSLTIPRDRFTVITGLSGSGKSTLAFDIVFGEGQRRYLESLNAYARQFVQPAA RPDVDALFGIPPTVAIEQRVSRGGRKSTVGTLTEIQPFLRLLYVKLGTQYCPKCDVPVSP QSFDAIAAQILRDYRGASVELLAPLVTNRKGLYTALAKWAKGKGFAQLRVDGDYLPTAKW PRLDRYVEHTIELPVGMVVVGPEHEAVLRTQLAEALEHGKGVVKVLQLGKVGAQPHTFST LRACPSCGDSFPEPDPRLFSYNAKHGWCESCYGTGQRTIGRVEDANELDLADTEQVTDEV CPTCDGARLNPVARAVRFRDLGIHELSAQPVAKVAGFFETLQLEGRETDIARDLVAEIRG RLDFLQQVGLAYLALDRGAPTLSGGEAQRIRLAAQLGSNLRGVCYILDEPTIGLHSRDNR MLLDTLEALRDRGNTLLVVEHDEDTIRRADHVIDLGPGAGVRGGEVVAEGTLPDLMAAPQ SATGACFRAPLQHPMRPPPAIVADHPFLVVKNATLHNLQAVDARLPLGRLTVVTGVSGSG KSTLARDVIHASLHALLGDPDAQRARRRGEAQTSAAEPVGCDRIEGWQAVGRVLEVDQTP IGKTPRSCPATYVGFWDAIRKLFAETFEAKTRGWNASRFSFNTGAGRCPVCEGQGQTTVE MSFLPDVKLPCDACGGARFNPETLTVRWRDKTVAEVLAMPVDAAVDFFAAHPSIAHPLAL LQDVGLGYLTLGQPSPTLSGGEAQRIKLVTELAKVRGRAGESAKTGGRPLPPEKHTLYVL DEPTVGLHMADVDKLIRVLHRLADAGHTVLAIEHDLDVMAEADWLLDLGPEGGDGGGRIV AQGPVADVCATAGSHTATILGEFLASRAVKEEGAVAAAPRGKGSTKKARKAS NT seq 5739 nt NT seq  +upstreamnt  +downstreamnt atgtccgaccgcatccgcatcttcggcgcgcgccagaacaacctcaagaacctctcgctc gacatcgcgctgaacgagctgacggtcgtcaccggcgtctccggctccggcaaatcctcg ctggtcttcgacacgctgtacgcggaaggccagcgccgttacgtcgagactttctcgccc tacgcgcggcagttcctcgaccgcatggacaaaccgcaggtcgaccgcatcgaaggcgtc ccgccggcaatcgcgatcgaccagaccaaccccgtccgtacttcgcgctccacggtcggc acgatgaccgagctgaccgatcacttcaagctgctgtacgcccgcgcctcgaaactctac tgccgcggctgcggccaggaagtgcgccgcgacgatccggacagcgtgcacgcggcgctc gccgaacgctgcgcggccgacgacccgcgcctggtgctgaccttcgcggtgccggtgccg aaaaacttcaccgaagacgaagtcacgcagctgctgaaccagcagggctacacccgcatc cattcgcgtgacagcggcaacggcggcgacgtgctgaacgtcgtacaggaccgcttccgc ttctccaacgccgaacgcagccgcgtcatcgaagcggtcgaaaccgcgatgacgcacggc cacggccggctcgcggtgcgcgcgcaaggggagggcggcgaaaccgtctggcgcttctcg cgcgacctgcactgcgccgactgcgacatccactattcggaccccacgccgggcctcttc tccttcaactccccgatcggcgcctgcgacacctgccgcggtttcggccgcgtgatcggc gtcgatttttcgctggtgatcccggacgaatcgaagacgctcgccgaaggcgccgtgaag ccgtggcagaccgcgagctatcgcgaatgccaggacgatctcgcgaagatggcgaagaaa tacggcgtcgcgatggacgtgcccttccgcgacctgccgccggaacaccggcaatggctg ctcgaaggcgatcccgagtggaagagctgggaagcgtcgtggccgcgcaagtggtacggc gtgcgtcacttcttcgactggctggaaacgaaagcctacaagatgcacatccgcgtgctg ctgtcccgctaccgcagctacacggaatgcccggcgtgcaaaggcgcaagactgaagccc gaggcgctcctctggcgcctaggcgaaaaagcagcaaccgagacggcgcaagccaacgag aataccccgcagggagccgccgacgcgggggctttcggggcgaggcgtccgccacgcgtt caacgagcaccggaagcccccgtggcggcggcggatcgaagcccgcatctcgccgccgaa aaacccggattggccatccacgaactgatggcccacccggttagccgcgtgcgcgacttc atcgcccgcgtcgaactcccctcaggcctcgacgaagcgactgaactcctgctcggcgaa atccgtagccgcctcgactacctcgcgaatgtcggcctcgcctacctcacgctcgaccgc caatcccgtaccctctccggcggcgaagtccagcgcatcaacctcacgaccgcgctcggc acctcgctcgtgaacaccctcttcgtcctcgacgaaccctcgatcggcctgcatccgcgc gacatcgaccgcatcctcgcagtgatgacgagattgcgcgacgccggcaacacgctggtc gtcgtcgaacacgacccccagctgatgtccgccgccgaccgcctgctcgacatcggcccc ggtcccggcgaacgcggcggccagatcgtcgcctacgcgccgcccgcgcaactcgccgcc gacccggcttcgctcaccggcgcctacctcgccggcaagaaacgtgtcgatgccggccgc aggccgcgcccggtcgacaaggccgaccccgtgctgcgcctcgtcggtgcccgcgaacac aacctgcgcgagctcgacatcgacattccgctcggcaagctggtgtgcgtctccggcgtc tccggctccggcaagtccacgctgatccaggacgtgctctaccccgcgctcgccaaacat ttcggccacggcaccgaagcccccggcgctttcgcacgcctcgaaggcctggagcagatc tccggcgtcgtgatggtcgaccagtccgcgatcggcaagagcgcgcgctccaatccggtc agctacgtcggcgcgtgggacgcgatccgcgcgctgttcgcggcgctgccggaagcgaag acgcgcggctacacccccggcactttcagcttcaactccggcaccggccgctgcccgacc tgcaccggctcgggtttcgagcacgtcgagatgcagttcctgtccgacgtctacctgcgc tgccccgactgcgacggcaagcgttatcgctccgaagtgctggagctccagtggcgcgac cggtcggtgtcggacgtgctcgacatgaccgtctccgaagcgctggccttcttcgccgac cagcccgcggtgcaggccgcactcgccccgctcgccgatgtcggcctcgaatacctgaag ctcggccagccggtgccgacgctgtccggcggcgaggcgcagcgcctcaagctcgccggc cacctcgccgaagcggcgaagctgtcgggcaagaaatccaggacgaaatcgcagtccggc cgcctgcttttcctgttcgacgaacccacgacgggactccacttcgaggacgttgcgacc ctgctgcgcgccttcgaaaaactgctcgacgccggccacgcgctggtcgtcatcgaacac aacctcgacgtgctgctcgccgccgactggttgatcgacctcgggcccgaaggcggcgag gacggcggcgagctggtcgtcgccggcacgccgcataccgtgatgggctgcgcggcgtcg cacaccggcatcgcgatgcgcgcctacgccgactcgctgggcaagccgacggctgcggtc gccgaacctgtcgcccgttaccgcgccatggccgccccggcgatcgagatccgccacgcg cgcgagcacaacctgaagaacgtcagcctgacgatcccgcgcgaccgcttcaccgtcatc accggcttgtcgggctcgggaaaatccacgctcgctttcgacatcgtcttcggcgaaggc cagcgtcgctacctcgaatcgctcaacgcctacgcgcgccagttcgtgcagccggcggcc cgccccgacgtcgatgcgctattcggcattccgccgacggtcgcgatcgagcagcgcgtc agtcggggcggcaggaagagcacggtcggcacgctgaccgagatccagcccttcctgcgc ctgctgtacgtgaaactcggcacgcagtactgcccgaagtgtgatgtgccggtgtcgccg cagagcttcgacgcgatcgcggcgcagatcctgcgcgactaccgcggcgcgtcggtcgaa ctgctcgcgccgctggtgacgaaccgcaagggcctgtacaccgcgctcgcgaagtgggcc aagggcaagggttttgcgcagctgcgcgtcgacggcgactacctgccgaccgcgaaatgg ccgcggctggaccgctacgtcgagcacaccatcgagctgccggtcggcatggtcgtcgtc ggacccgagcacgaggcggtgctgcgcacgcagttggcggaagcgctcgagcacggcaag ggcgtcgtcaaggtgctgcagctcggcaaggtcggcgcccagccgcacaccttctcgacg ctgcgcgcctgcccctcctgtggcgacagcttcccggagccggatccacgcctgttctcg tacaacgccaagcacggctggtgcgagagctgctacggcaccggccagcgcacgatcggc cgcgtcgaggacgccaacgagctggatctcgccgacaccgaacaggtcaccgacgaagtc tgcccgacctgcgacggcgcgcgcctgaatccggtcgcgcgcgcggtgcgtttccgcgat ctcggcatccatgaactctccgcgcagccggtcgcgaaagtcgcaggtttcttcgagact ctgcagctcgaaggccgcgagaccgacatcgcgcgcgacctcgtcgccgagatccgcggc cgcctcgacttcctgcagcaggtcggcctcgcctacctcgcgctcgaccgcggcgcaccg acgctctccggcggcgaagcgcagcgcatccgcctcgccgcccagctcggctccaacttg cgcggcgtgtgctacatcctcgatgaacccacgatcggcctgcactcgcgcgacaaccgc atgctgctcgacacgctcgaagcgctgcgtgaccgcggcaacacgctgctggtcgtcgag catgacgaggacacgatccgccgcgccgaccacgtcatcgacctcggccccggcgccggc gtgcgcggcggcgaagtcgtcgccgaaggcactttgcccgacctgatggcggcgccgcaa tcggcgaccggcgcctgcttccgcgcgccgctgcagcatccgatgcgcccgccgccggcg atcgtcgccgatcaccccttcctcgtcgtgaagaacgccacgctgcacaacctgcaggcg gtcgacgcgcgcctgccgctcgggcgcctgacggtcgtcaccggcgtctccggctcgggt aaatcgacgctcgcgcgcgacgtgatccacgccagcctgcacgccctgctcggcgacccc gacgcgcagcgtgcccgccgccgcggcgaagcgcagacgagtgccgcggagccggtcggc tgcgaccgcatcgaaggctggcaggccgtcggccgcgtgctcgaagtcgaccagacgccg atcggcaagacgccgcgctcctgccccgcgacctacgtcggcttctgggacgcgatccgc aagctcttcgccgagacgttcgaggccaagacgcgcggctggaacgcgtcgcgcttctcc ttcaacaccggcgccgggcgctgcccggtatgtgaaggccagggccagaccaccgtcgag atgagttttttgcccgacgtgaagctgccctgcgacgcctgcggcggcgcgcgcttcaac ccggagacgctgaccgtacgctggcgcgacaaaacggtcgccgaagtgctggcgatgccg gtcgacgcggccgtcgacttcttcgccgcgcacccgtcgatcgcccacccgctggcgctg ctgcaggatgtcggcctcggctacctcacgctcggccagcccagcccgacgctctcgggc ggcgaggcgcagcgcatcaaactcgtcaccgaacttgcgaaagtgcgcggtcgtgcgggc gagagtgccaagaccggcggccgcccgctgccgcccgaaaagcacaccctctacgtgctc gacgagccgaccgtgggcctgcacatggccgacgtcgacaagctgatccgcgtgctgcat cgcctcgcggatgccggtcacaccgtgctcgcgatcgagcacgacctcgacgtgatggcc gaggccgactggctgctcgacctcggcccggaaggcggtgacggcggcgggcgcatcgtc gcgcaggggccggtcgcggacgtgtgcgcgaccgccggctcgcacaccgcgaccatcctc ggggaatttctcgcgagccgcgcggttaaggaggaaggtgccgtcgccgcggcgccgcgc ggcaagggaagcacgaagaaggcgcggaaggcctcatga

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