KEGG   Azospirillum ramasamyi: DM194_07755
Entry
DM194_07755       CDS       T05500                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
azm  Azospirillum ramasamyi
Pathway
azm03030  DNA replication
azm03410  Base excision repair
azm03420  Nucleotide excision repair
azm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:azm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DM194_07755
   03410 Base excision repair
    DM194_07755
   03420 Nucleotide excision repair
    DM194_07755
   03430 Mismatch repair
    DM194_07755
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:azm03032]
    DM194_07755
   03400 DNA repair and recombination proteins [BR:azm03400]
    DM194_07755
Enzymes [BR:azm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     DM194_07755
DNA replication proteins [BR:azm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DM194_07755
DNA repair and recombination proteins [BR:azm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     DM194_07755
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DM194_07755
   MMR (mismatch excision repair)
    DNA ligase
     DM194_07755
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DM194_07755
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT HHH RNA_ligase RUBY_RBDX
Other DBs
NCBI-ProteinID: AWU94168
UniProt: A0A2U9S892
LinkDB
Position
complement(1679328..1681694)
AA seq 788 aa
MQDLFDTPPNPRSIDVEALAPDQAAAELAALAAEIAHHDRLYHQQDQPEISDADYDALVR
RNLAIEARFPDLRRADSPSLRVGAAPAAGFGKVRHAIPMLSLGNAFAPEDVAEFDARVRR
FLGLSDDAPLTFVAEPKIDGLSCSLRYERGELVLAATRGDGAEGENVTANVRTIRDVPHR
LPAPFPDVLEVRGEVYMNRDDFLAMNAARAEKGEQLFANPRNAAAGSLRQLDPSITASRP
LCFFGYALGEVSEPIAATQWGIRERLKGWGFQLNRPAELCDGRDKLLAYYEGIGRRRAGL
PFDIDGVVYKVDSLELQQRLGFVSRAPRWAIAHKFPAEQAQTRLKAITIQVGRTGALTPV
AELEDITVGGVVVSRATLHNEDEIARKDIRVGDLVVVQRAGDVIPQVVEVVLSQRPADSV
PYVAPETCPVCGSLAIREAGEVVRRCTGGLICAAQAKERLRHFVSRDAFDIEGLGEKIIE
EFWDEGFIKSPVDIFTLEGRVELIGRPGWKEKSVENLFKAINQRRNGIDLHRVIYALGIR
HVGEVTAKSLARHYKTMEGWVDGMLAAEQAMPGQEWRDLHELKGVGRATADAILGWFADP
DCGAKLDFYAGNDALRLETIIASLGIKGVKKPAAQALAERYGTLADWRAAMERASGQIPG
QAWLDLVATPDVGEVAAEELAGFFAEERNLVIVRGLMERLTVLAAEAPKASNSPIAGKTV
VFTGTLERMTRSEAKARAESLGAKVAGSVSGKTDYLVAGADAGSKAAKAKDLGVEILTED
EWLAKIGG
NT seq 2367 nt   +upstreamnt  +downstreamnt
atgcaggacctgttcgatacgccgcccaatccccgcagcatcgacgtcgaggcgctggcg
ccggatcaggcggcggcggaactggcggcgctggccgccgagatcgcccatcatgaccgg
ctctatcaccagcaggaccaaccggagatctccgacgccgactatgacgcgctggtccgc
cgcaacctcgccatcgaggcgcgcttccccgatctgcgccgcgccgattcgcccagcctg
cgcgtcggcgccgccccggccgccggcttcggcaaggtgcgccacgccattcccatgctg
tcgctcggcaacgccttcgcgcccgaggatgtggcggagttcgatgcccgcgtccgccgc
tttctcggcctgtccgacgacgcgcctctgaccttcgtggcggagccgaagatcgacggc
ctgtcctgctcgctgcgttacgagcgcggtgaactggtgctggccgccacccgcggcgac
ggggcggagggcgagaacgtcaccgccaatgtccgcaccatccgcgacgtgccgcaccgc
ctgccggcccccttccccgatgtgctggaggtccgcggcgaggtctatatgaaccgcgac
gacttcctggcgatgaacgccgcccgcgccgagaagggggagcagctgttcgccaacccg
cgcaacgcggcggccggcagcctgcgccagctcgacccctccatcaccgcgtcccggccg
ctctgcttcttcggctatgcgctgggcgaagtgtcggagccgatcgccgcgacgcaatgg
ggcatccgcgagcggctgaagggctggggcttccagctgaaccgtccggcggagctgtgt
gacggcagggacaagctgctggcctattacgagggcatcggccggcggcgcgccggcctg
cccttcgacatcgacggcgtcgtctacaaggtcgacagcctggagcttcagcaacggctg
ggcttcgtcagccgggcgccgcgctgggccatcgcccacaaattcccggcggagcaggcg
cagacccggctgaaggcgatcaccatccaggtcggccgcaccggcgcgctgacccccgtc
gccgaactggaggacatcaccgtcggcggcgtcgtggtcagccgcgccaccctgcataat
gaggacgagatcgcccgcaaggacatccgcgtcggcgacctcgtggtcgtccagcgcgcg
ggcgatgtcatcccgcaggtggtggaggtggtgctgtcccagcgccccgccgactccgtg
ccctatgtcgcgccggagacctgcccggtctgcggcagcctcgccatccgcgaggcgggc
gaggtggtccgccgctgcaccggcggcctgatctgcgccgcccaggccaaggagcggctg
cgccacttcgtctcgcgcgacgccttcgacatcgaagggctgggcgagaagatcatcgag
gaattctgggacgagggcttcatcaagtcgccggtcgacatcttcactctggaaggccgc
gtcgaactgatcggccggcccggctggaaggagaagtcggtcgagaacctgttcaaggcg
atcaaccagcgccgcaacggcatcgacctgcaccgggttatctacgcgctcggcatccgc
catgtcggcgaggtgacggcgaagtcgctcgctcgccattacaagacgatggagggctgg
gtcgacggcatgctggcggcggaacaggcaatgccggggcaggagtggcgcgacctgcat
gaactgaagggggtggggcgggcgaccgccgacgccatcctcggctggttcgccgatccc
gattgcggggcgaagctggacttctatgccggcaacgacgcgctgcggctggagaccatc
atcgcctcgctgggcatcaagggcgtgaagaagccggcggcccaggcgctggccgagcgg
tacggtacgctggccgattggcgggcggcgatggagcgggcgtccgggcagattccgggg
caggcttggctcgacctcgtcgccaccccggatgtcggcgaggtcgcggcggaggaactc
gccggcttcttcgcggaggagcgcaacctcgtcatcgttcgcggcctgatggagcggctg
accgtgctggcggcggaagcgccgaaggcaagcaactctcccatcgccggcaagacggtg
gtcttcaccggtacgctggagaggatgacccggtcggaggccaaggcacgcgccgagtcg
ctgggcgccaaggtcgcgggctcggtctccggcaagaccgactatctggtcgccggggcg
gatgccggcagcaaggccgccaaggccaaggatctgggggtcgagatcctgaccgaggat
gaatggctggcgaagatcggcggctga

DBGET integrated database retrieval system