Azospirillum sp. TSH100: E6C72_05080
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Entry
E6C72_05080 CDS
T09516
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
azs
Azospirillum sp. TSH100
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azs03400
]
E6C72_05080 (addB)
Enzymes [BR:
azs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E6C72_05080 (addB)
DNA repair and recombination proteins [BR:
azs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E6C72_05080 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Katanin_con80
Motif
Other DBs
NCBI-ProteinID:
QCG87162
UniProt:
A0A4P7YHB9
LinkDB
All DBs
Position
1:complement(1056513..1059488)
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AA seq
991 aa
AA seq
DB search
MPPTVTHPKVYSIPTGAPFVDRLAAGIMERVGGDPMALAGVTVLLPTRRACRSLQAAFLR
RSGGQPTLLPRMAPLGELDAGDISLTEEELPDVPLDLPEAISPLNRQMTLARLILGAEGL
SATTAQAVRLGADLGRLIDAVWTERAGFEKLESLVPEDYAEHWQVTLKFLRIITEVWPAI
LESTGETDPAKRRNLALETQAALWQAAPPPGMVIAAGSTGSIAATTELLSVIARLPQGAV
VLPGLDTGADDTIWDAIAGDESHPQHGLSQLIRLLGVERAEVQPWTDAPEPRGARARLIA
EAMRPAATTEGWRELSGVEASALDGLTRIDAATSEEEAQVIALLMRHALETPTKTAALIT
PDRNLGRRVAMALARWGILVNDSGGQPLAHTAVGTYLRLTAELAASRVHPLALLALAKHP
MAAGGRDSADFRAAARALERIVLRGPRPAEGFDGMLAALEQADRFDHEEQQEFLRTWLVD
IGQRAAPFLEALNNETPLADLVRAHVAFCESLAADDALTGAERLWRQDDGEEAARFVHDL
LDAADGFPAIPAKDYPALLDALMSARAVRPRYGLHPRLFILGPMEARLQHLDLTILGGLN
EGTWPPAASADPWMSRPMRRDFGLPSPERLVGMSAHDFAHACGAPEVVLTRAARVEGTPT
VPSRWLLRLETVLRALDLDGVIEERGACWLGWARGLDEPDRVQPVAAPEPRPPLAARPRK
LSVTEIETWMRDPYAIYARHALRLRALDPIAADPGASDRGQIIHDTLDAFVRDHPGPLPH
DALDRLIALGRERFGPLLRSHPDVWAFWWPRFERVAGWFVDLERERRPRLRPLATEVPGR
LELSGPGGPFTLTAKADRIDRGPDGLVVIDYKTGTPPSAREIELGFAPQLPLEAAIAAAG
GFSGVDKGEVAELTFWRLSGGDPAGEEKPVKGDPAVLGEEARAGLEALIAQFDDPETPYR
SRPRPAMAPRYTDYAHLARVQEWSSGGGEGE
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgccccccacagtgacccaccccaaagtctacagcatccccacgggcgcccccttcgtc
gacaggctggcggcggggatcatggaacgggtcggcggcgacccgatggcgctggccggg
gtcaccgtgttgctgccgacgcggcgcgcctgtcggtccttgcaggcggctttcctgcgc
cgctccggcgggcagccgaccctgctgccgcggatggcgccgcttggcgaactcgacgcc
ggcgacatcagcctgaccgaggaggaactgcccgacgtcccgctcgacctgccggaggcg
atctcaccgctgaaccggcagatgaccctggcccggctgatcctgggagccgaggggctg
tcggcgaccacggcgcaggcggtgcggctgggcgccgacctcggccggctgatcgacgcg
gtgtggaccgagcgcgccggcttcgagaagctggagtcgctggtgccggaggattacgcc
gagcactggcaggtcacactgaagttcctgcgcatcatcacggaggtctggcccgccatc
ctcgagtcgaccggcgagaccgacccggccaagcgccgcaacctggcgctggagacgcag
gccgccctgtggcaggccgccccgccgccgggcatggtgatcgccgccggctccaccggc
tccatcgcggcgacgacggaactgctctcggtcatcgcccggctgccgcagggggccgtg
gtgctgcccgggctcgacaccggggccgacgacaccatctgggacgccatcgccggggac
gaatcccacccgcagcacgggctgtcgcagctgatccgccttctgggcgtcgaacgcgcc
gaggtgcagccctggaccgacgcgccggagccgcgcggcgcccgcgcccgcctgatcgcc
gaggcgatgcgcccggcggcgaccaccgagggctggcgcgagctgtcgggggtggaggct
tcggcgctggacgggctgacccgcatcgacgccgccacctcggaggaagaagcgcaggtc
atcgccttgctgatgcgccatgcgctggaaacgccgaccaagaccgccgccctcatcact
cccgaccgcaacctgggacgccgggtcgccatggcgctggcgcgctggggcattctggtc
aacgactccggcggccagccgctcgcccacaccgcggtcggcacctatctgcggctgacg
gcggagctggcggcgagccgggtccatccgctggcgctgctggcgctcgccaagcatccg
atggcggcgggtggccgcgactcggcggatttccgcgccgccgcccgcgcgctggagcgc
atcgtgctgcgcgggccccgcccggcggagggcttcgacggcatgctggcggcgctggag
caggccgaccgtttcgaccatgaggagcagcaggaattcctgcgcacctggctggtcgac
atcggacagcgcgccgctcccttccttgaggcgctgaacaacgagacgccgctggccgac
ctcgtgcgcgcccatgtcgccttctgcgaatcgctggccgccgatgacgcgctgacggga
gcggaacggctgtggcgccaggacgacggcgaggaggcggcgcgcttcgtccacgatctg
cttgacgcggccgacggcttcccggcgatcccggccaaggattacccggcgctgctcgat
gcgctgatgagcgcgcgggcggtgcgtccccgctatggtctgcacccgcgcctgttcatc
ctggggccgatggaagcgcgtctccagcatctcgacctgaccatcctgggcgggctgaac
gagggcacctggccgccggccgcctccgccgatccgtggatgtcgcggccgatgcggcgc
gatttcggcctgcccagcccggaacggctggtcggcatgtcggcccacgacttcgcccat
gcctgcggcgcgccggaagtggtgctgacccgcgccgcgcgggtggagggcacgccaacc
gtgccgtcgcgctggctcctgcggctggaaaccgtgctgagggcgctggatctggacggc
gtcatcgaggagcgcggggcctgctggctcggctgggcgcgcgggctggacgagccggac
cgggtgcagccggtggcggcgccggagccgcgcccgccgctggccgcccggccgcgcaag
ctgtcggtgaccgagatcgagacctggatgcgcgatccctacgccatctatgcccgccat
gccctgcggttgcgcgcgctcgaccccatcgccgccgatccgggggcgtccgaccgcggc
cagatcatccacgacacgctcgacgccttcgtccgcgaccatcccggcccgctgccgcat
gacgcgctcgaccggctgatcgcgctggggcgggaacgtttcggtccgctgctgcgcagt
catcccgacgtctgggccttctggtggccgcgcttcgagcgggtggccggctggttcgtc
gatctggaacgcgaacgccgcccccgcctgcgcccgctggcgaccgaggtgccggggcgg
ctggagctgtccggccccggcggccccttcaccctgaccgccaaggccgaccgcatcgac
cgcggccccgacgggctggtggtgatcgactacaagaccggcaccccgccgagcgcgcgg
gagatcgagctgggtttcgccccgcagctgccgctggaggccgcgattgccgccgccggc
gggttcagcggggtggacaagggcgaggtggcggagctgaccttctggcgcctgtccggc
ggcgacccggccggcgaggaaaagccggtgaagggggacccggccgtattgggtgaagag
gcacgggccggtctggaggcgctgatcgcgcagttcgacgacccggagacgccttaccgc
tcgcgtccacggccggcgatggcgccgcgctacaccgactatgcgcacctcgcccgcgtg
caggaatggtcgtcgggcggcggagagggggaatga
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