Azospirillum sp. TSH58: TSH58p_25505
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Entry
TSH58p_25505 CDS
T05449
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
azt
Azospirillum sp. TSH58
Brite
KEGG Orthology (KO) [BR:
azt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azt03400
]
TSH58p_25505
DNA repair and recombination proteins [BR:
azt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TSH58p_25505
Archaeal homologous recombinant proteins
TSH58p_25505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
ABC_ATPase
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AWJ86797
UniProt:
A0A2S1XQN9
LinkDB
All DBs
Position
TSH58_p02:918745..922515
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AA seq
1256 aa
AA seq
DB search
MRILAVRGCNLASLDGTFAVELAGGPLRHAGLFAITGPTGAGKSTILDALCLALFDRMPR
LPDGRGVALGASGDTDAISTTDVRSVLRRGAGAGWAEVDFAGIDGAAYRARWELRRARQN
ARGQLQKQTMSLTALADGKRLGDGKTSVLDEISSRLGLSFEQFRRAVLLAQGDFANFLKA
PATERSALLELLTGTEIYSRISVAAHERSREEQRALEALEAQCAGIGVLTDDERAVLDAE
AGAAAEAVRQEEAAFEQARATVAWHEQDARLGKAEMEAAAASARSEEVWQEAAARREEAA
LLRRLQPLRVRLGEADRCAAAASEAGEALARAQTAVTEAQDRLVHAEARHRAVRGAYETA
RSAIDAAEPELEQAAALDAEIAALAGQQAGAHADAATAEADARAIGESWTAIRTALDQAR
AESAEREGWLAGQTALQPVADQWARWDALLLRHRDSARAVREAEAEAARAATEAAAHEAE
RIRLSTVRRDAAARRDEAEQALSALKAEPVESLDTLRGRRTALAERRDGLSVLSQLAERA
ARLAADAAEAEAERKRQRTAAVEGEIRAAEMKARLDQRRAALEEADTTLHRLRLARSEGV
ASLRAQLADGESCPVCGATEHPWGDGHTPLDQLAEDQERHVAALRAEVTGLATDQGAHTA
AAKAALEQAVVLDGRLAALAADRTAVAERWAERAPGFGLPAEPDAETVTRRLAEVDVELT
AAGQAEAAALDHKARLDAAVQACRTRDAALTEAERAIETRTRQLDAARHAESLAVARRDQ
AADTRTAVRAELAQPFAGLEGWDSRLDRDPEGFRESIGARVAEVLRQREGLAQARRDVEA
LERQAGAKAAELEGARQAEQAARRRCEGLAAALEERRGARGSLLGGRAVAAVKKELTEAC
RRTEALVEQATIARQDAAARLSGAEQTVATRGDSARRCAAEAEAAADALAAAAERCGVTV
EAARAHLVRDEDWLTGEERALAALESARRETALLAAERTRLRREHHAAGHPALGAEEAGE
AVAETGRRLQEARARLGEAQARLRADIENRGRLAAVLDRVEAQRKAQGLWATMAQLIGSA
DGRKLRNFAQSLSLDLLLVQANRYLADLARRYRLERVGGADLEIQVVDGEMGDERRGVHS
LSGGEMFLVSLALALGLSAMAGGSGGGGIGTLFIDEGFGTLDPGSLDLALSCLEALQATG
RQVGVISHVPALVERIGVQVRVTPQGGGRSAVTVTRGTLAAPSPDAAAERELLLPL
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgcggattctggcggttcgcggctgcaatctggccagcctggacgggaccttcgcggtg
gaactggccggagggccgctgcgccacgccggcctgttcgccatcaccggcccgaccggg
gcgggaaagagcaccatcctggacgcgctgtgcctcgccctgttcgaccgcatgccccgg
ctgccggacgggcgcggcgtggcgctgggcgccagcggggacaccgacgccatcagcacc
accgacgtgcgcagcgtcctgcgccgcggtgccggggccggctgggccgaggtggatttc
gccgggatcgacggcgccgcctaccgggcgcgctgggagctgcggcgggcccggcagaac
gcgcgcggccagttgcagaagcagacgatgagcctaaccgcgcttgcggacggcaagcgg
ctgggcgacggcaagaccagcgtgctggacgagatctccagccggctggggctgagcttc
gagcagttccgccgcgccgtcctgctggcccagggcgatttcgccaacttcctgaaagcc
ccggcgaccgagcgctccgccctgctggagctgctgaccggcaccgagatctactcccgc
atctccgtcgccgcgcatgagcgctcccgggaggagcagcgggcgctggaggcgctggaa
gcgcaatgcgcgggcatcggcgtgctgaccgacgacgagcgcgccgtcctggacgccgag
gccggagcggcggccgaggcggtgcgccaggaggaagcggcgttcgagcaggcccgcgcc
accgtcgcctggcatgagcaggacgcccggctgggcaaggcggagatggaggccgccgcc
gcgagcgcacggtccgaagaggtttggcaggaggccgcggcgcggcgggaggaggcggcc
cttctgcgccggctccagccgctgcgggtccggttgggcgaggcggaccgctgcgccgct
gcggcctcggaagccggggaggctctggcccgagcccagaccgcggtgacggaggcgcag
gatcggctggtccatgccgaggcccgtcatcgcgcggtgcgcggcgcctacgagacggcc
cgcagcgccatcgacgccgccgagccggagttggaacaggccgccgccctcgatgccgag
atcgccgcgctggccggccaacaggccggggcgcacgcggacgccgcaacggcggaggcg
gacgccagggccatcggggagagttggaccgccatccggacggcgctggaccaggcgcgc
gccgaatcggcggagcgggagggctggctggccggccagacggccctgcagcccgtggcc
gaccagtgggcgcgctgggacgcgctgctgctgcgccaccgcgactcggcgagggccgtg
cgggaggcggaggcggaggctgcccgcgccgccacggaggccgccgcccacgaggcggaa
cggatccgcctgtccaccgtccggcgggacgccgccgcgcggcgggacgaagcggagcaa
gcgctgtccgcgctgaaggccgagccggtggagtcgctggacaccctgcgcggccgccgc
acggcgctggcggagcgccgcgacgggctgtccgtgctgtctcagttggcggagcgggcc
gcccggctggccgcggacgccgcggaggccgaggcggaacgcaagcggcaacgcaccgcc
gccgtggagggggagatccgcgccgcggagatgaaggcacggctggaccagcgccgggcg
gcgttggaggaggcggacaccacgctccaccgcctgcgccttgcccgcagcgagggcgtg
gcgtcgctgcgcgcccagttggcggacggcgagtcctgcccggtctgcggtgccacggag
catccctggggggacgggcacacgccgctcgaccagctggccgaggaccaggaacgccac
gtcgccgccctgcgcgccgaggtcaccgggttggccaccgaccagggcgcccacaccgcc
gccgcgaaggcggcgctggaacaggctgtggtcctggatggccggctggccgccctggcc
gcggaccggacggccgtggcggagcgctgggcggagcgggcgcccggcttcgggctgccc
gccgaaccggacgcggagaccgtcacccggcggttggccgaggtggacgtggaactgaca
gcggccggacaggccgaggcggcggcgctggaccacaaggcgcggctcgacgccgcggtg
caggcctgccggacgcgggatgcggcgctgaccgaggccgagcgggccatcgagacgcgg
acgcgccagctcgacgccgcccgccatgccgaatcgctcgccgtggcgcggcgtgatcag
gcggcggacacgcggacggcggtgcgggcggagctggcccagcccttcgccgggctggaa
ggctgggacagccggctcgaccgcgatccggaggggttccgcgagagcatcggcgcgcgg
gtcgccgaggtcctgcgtcagcgcgaggggttggcccaagcgcggcgcgacgtggaggcc
ctggagcggcaggccggcgccaaggcggcggaactggaaggcgcgcggcaagccgaacag
gcggcgcggcggcggtgcgaggggctggccgcggcgctggaggaacggcgcggcgcacgg
gggtccctgctgggcggacgcgcggtcgccgcggtgaagaaggagctgaccgaggcctgt
cgacggaccgaggccctggtcgagcaggccacgatcgcccggcaggacgcggcggcccgc
ctgtccggggcggagcagaccgtcgccacgcggggcgactccgcgcgccgctgcgccgcc
gaggcggaagcggcggccgacgccctggccgccgcggcggagcgctgcggcgtgacggtg
gaggcggcgcgcgcccatctggtccgggacgaggactggcttaccggggaggaacgggcg
ctcgccgccctcgagtcggcgcggcgcgagacggcgcttctggcggcggagcggacgcgg
ctgcggcgggagcaccacgccgccggacaccccgcgctcggcgccgaggaggccggcgag
gccgtcgccgagacgggccggcgcctgcaggaggcccgcgcccggctgggcgaggcccag
gcccggctgcgcgccgatatcgagaatcgcggacgcctcgccgccgtgctcgaccgggtg
gaggcgcagcgcaaggcccaggggctgtgggcgaccatggcgcagctcatcggctccgcc
gacgggcgaaagctgcgcaacttcgcccagagcctcagcctcgacctgctgctggtgcag
gcgaaccgctatctggccgatctcgcccgccgctaccggctggaacgggtgggcggggcc
gatctggagatccaggtggtggacggcgagatgggcgacgagcggcgcggcgtgcacagc
ctgtccggcggcgagatgttcctggtgtcgctggccctggcgctcggcctgtcggccatg
gcggggggcagcggcggcggcgggatcggcacgctgttcatcgacgaggggttcggcacg
ctggaccccggcagcctggatctggcgctgtcctgcctggaggcgcttcaggccaccggg
cggcaggtcggcgtcatcagccacgtcccggcgctggtggagcggatcggcgtgcaggtg
cgcgtcaccccgcagggcggcgggcgaagcgccgtgacggtcacccgcgggactctggcc
gccccctcaccggacgcggcggcggagcgggaactgctgctgcccctgtag
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