Burkholderia ambifaria MC40-6: BamMC406_0490
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Entry
BamMC406_0490 CDS
T00684
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac00470
D-Amino acid metabolism
bac00550
Peptidoglycan biosynthesis
bac01100
Metabolic pathways
bac01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BamMC406_0490
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BamMC406_0490
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BamMC406_0490
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bac01011
]
BamMC406_0490
Enzymes [BR:
bac01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
BamMC406_0490
Peptidoglycan biosynthesis and degradation proteins [BR:
bac01011
]
Precursor biosynthesis
Amino acid ligase
BamMC406_0490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATPgrasp_ST
ATP-grasp_4
TTL
ATPgrasp_YheCD
PPR
Motif
Other DBs
NCBI-ProteinID:
ACB62987
UniProt:
B1YSS6
Structure
PDB
LinkDB
All DBs
Position
1:556839..557780
Genome browser
AA seq
313 aa
AA seq
DB search
MSGIDPKRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAERPLSALKDE
GFVRAFNALHGGYGENGQIQGALDFYGIRYTGSGVLGSALGLDKFRTKLVWQQTGVPTPP
FETVMRGDDYAARATDIVAKLGLPLFVKPASEGSSVAVLKVKTADALPAALSEAATHDKI
VIVEKSIEGGGEYTACIAGDLDLPLIKIVPAGEFYDYHAKYVANDTQYLIPCGLPAEQET
ELKRIARRAFDVLGCTDWGRADFMLDAAGNAYFLEVNTAPGMTDHSLPPKAARSIGIGYS
ELVVKVLSLTLND
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggatcgatccgaaacgtttcggcaaggtggcagtgttgttcggcggcgaatcc
gccgagcgcgaggtgtcgctcacctcgggccgcctcgtgctgcagggcctgcgcgacgcg
ggcatcgacgcgcatccgttcgacccggccgagcggccgctgtcggcgctgaaggatgaa
ggcttcgtgcgcgcgttcaacgcgctgcacggcggctatggcgagaacggccagatccag
ggcgcgctcgatttctacgggattcgctacacgggcagcggcgtgctcggctcggcgctt
ggtctcgacaagttccgcacgaagctcgtgtggcagcagacgggcgtgccgacgccgccg
ttcgagacggtgatgcgcggcgacgactacgcggcgcgcgcgacggacatcgtcgcgaag
ctcggcctgccgctgttcgtgaagccggcgagcgaaggctcgagcgtcgcggtgctgaag
gtcaagacggccgacgcgttgcccgccgcactgtcggaagccgcgacgcacgacaagatc
gtgatcgtcgagaagagcatcgaaggcggcggcgaatacaccgcgtgcatcgccggcgat
ctcgatctcccgctgatcaagatcgtgccggcgggcgagttctacgactaccacgcgaag
tatgtcgccaacgatacgcagtacctgattccgtgcgggctgccggcggagcaggaaaca
gaactgaagcgcatcgcgcgccgcgcgttcgacgtgctcggctgcaccgactggggccgc
gcggatttcatgctcgacgccgccggcaacgcgtatttcctggaagtgaacacggccccc
gggatgaccgaccattcgctgccgccgaaggccgcgcgctcgatcggcatcggctattcg
gagctggtcgtgaaggtgctgtcgcttacgctcaacgactga
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