Burkholderia ambifaria MC40-6: BamMC406_1738
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Entry
BamMC406_1738 CDS
T00684
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac03030
DNA replication
bac03430
Mismatch repair
bac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BamMC406_1738
03430 Mismatch repair
BamMC406_1738
03440 Homologous recombination
BamMC406_1738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bac03032
]
BamMC406_1738
03400 DNA repair and recombination proteins [BR:
bac03400
]
BamMC406_1738
Enzymes [BR:
bac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BamMC406_1738
DNA replication proteins [BR:
bac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BamMC406_1738
DNA repair and recombination proteins [BR:
bac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BamMC406_1738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_14
AAA_22
AAA_5
DUF3646
AAA_30
TsaE
AAA_18
Mg_chelatase
AAA_2
AAA_assoc_2
Glyco_tranf_2_5
AAA_24
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACB64223
UniProt:
B1YRE9
LinkDB
All DBs
Position
1:complement(1940689..1943130)
Genome browser
AA seq
813 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLERILGEEQISFELQALRLLARAAQGSMRDALSLTDQAIAYSANEVTEAAVSGM
LGALDQTYMVRLLDALAAGNGPEILAIADEMSLRSLSFSTALQDLASLLHRIAWAQFAPG
SVLDEWPEAADLRRFADALSPEQVQLFYQIATVGRAELGLAPDEYAGFTMTLLRMLAFEP
AVGAGSAPGGQPAVPRAVPAPAPRATAAAAASAAAPKSPAVPVAAPAPKPPAAPAPAAAA
EVVRPQAAAPVAPAARPSPVQSGDAATSSAVKPVATAAAAASEAPAAPQPAANPAPQAAP
ASDAPPAVRNEPEPPAVAKRVDEPEPPAAAKRVAEPAAPAEPAPHATAATPAAPAARPSA
RGGAAAALDVLRNAGMRVSSDRSRGDAAPKQAVAQPAADKPAPSRPAVQVPTPRAAARAP
QAADTRQAPPPWEDIPPDEYVPLSADEMFGGAADDGFVPVFDSGPDDVRIAPKPAEARPS
APVDTRPLPPAIALDPIGFDGEWPALAARLPLKGVAYQLAFNSELTAVDATTLKLSVPVP
QYADAAQVAKLKAALADALGKPVEVAVEVGPARRTAAALDAAARAARQREAEQEIHGDPF
VQQLVRDFGARIVEGSVRPLADSAPDGAPPTLH
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaagtggcgtccgaaggatttcgcttcgctcgtcggc
caggagcacgtcgtcagggcgctcacgcacgcgctcgatggcgggcgtctccatcacgcc
tatctgtttaccggaacccgcggcgtcggcaagacgacgctgtcgcggatcttcgcgaag
gcgctcaactgtgaaaccggcgtcacgtcgcagccgtgcggcgtgtgccgcgcgtgccgc
gagatcgacgaaggccgcttcgtcgactacgtcgagatggacgcggcgagcaaccgcggc
gtcgacgagatggccgcgctgctcgagcgcgcggtgtacgcgcccgtcgatgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgacgaaccatgcgttcaacgcgatgctg
aagacgctcgaggagccgccgccgcacgtcaagttcatcctcgcgacgaccgacccgcag
aagattcccgtcaccgtgctgtcgcgctgcctgcagttcaacctgaagcagatgccggcc
gggcacatcgtgtcgcatctcgagcggatcctcggcgaagagcagatttcgttcgaactg
caggcgctgcgtctgctcgcgcgcgccgcgcagggcagcatgcgcgatgcgctgtcgctg
accgaccaggcgatcgcctattcggcgaacgaagtgaccgaagcggcggtgtccggcatg
ctcggcgcgctcgaccagacctacatggtgcggctgctcgatgcgctcgcggccggcaac
ggcccggagatcctcgcgatcgccgacgagatgtcgctacgcagcctgtcgttttccacc
gcgctgcaggatctcgcgagcctgctgcaccggatcgcatgggcgcagttcgcgccgggc
tcggtgctcgacgaatggccggaagcggccgacttgcgccgcttcgcggacgcgctgagc
cccgagcaggttcaactgttctatcagatcgcaacggtcggacgcgcggaactcggcctc
gctccggacgaatacgccggcttcacgatgacgctgctgcggatgctcgcgttcgagccg
gccgtcggcgccggcagtgcgccgggtggccagccggccgtgccgcgtgccgtacccgcg
cccgcgccgcgtgcgaccgccgctgctgctgcgtcggctgcggcgcccaagtcgccagcg
gtacccgtagcggcaccggcacccaagccgccagcggcacccgcaccggcagccgccgcg
gaggtcgtacgcccgcaggctgccgctccggtcgcgcccgccgcgcgtccgtcgccggtc
cagtccggtgatgcggcgacttcgtcggccgtgaagcctgtcgcgacagcggcagcggct
gcgagcgaagcgccggccgcaccgcagccggcagcgaacccggcacctcaggcggcaccg
gcgagcgatgcgccgccggccgtgcgcaacgaacctgaaccgccggctgtcgccaagcgc
gtcgacgaacctgaaccgcctgctgccgccaagcgcgtcgcggaacctgcagcgcctgcc
gaaccggcgccgcatgccacggcggccacgccagcagcccctgccgcgcgcccgtcggcc
cgcggtggcgcagctgccgcactcgacgtgctgcgcaatgccggcatgcgcgtgtcatcc
gaccgttcgcgaggtgacgccgcgccgaagcaggccgtggcccagccggccgccgacaaa
ccggcgccttcgcgtcctgccgtgcaggtgccgacgccgcgtgcggcggctcgcgcaccg
caggcagccgacacgcgccaggcgccgccgccgtgggaagacatcccgccggacgaatac
gtgccgctcagcgccgacgagatgttcggcggggcggccgacgacggcttcgtcccggta
ttcgacagcggccccgacgacgtgcgcattgcgccgaagccggcagaggcccgtccgtcc
gcaccggtcgacacgcgtccgctgccgcccgcgatcgcgctcgatccgatcggcttcgac
ggcgaatggccggcgctggccgcacggttgccgctgaagggcgtcgcgtatcagctggcg
ttcaacagcgagctgacggccgtcgacgcgacgacgttgaaactgtccgtgccggtgccg
cagtatgcggatgccgcccaggtcgcgaagctgaaggccgcgctggccgacgcgctcggc
aagcctgtcgaggtcgcggtcgaggtcgggcccgcgcggcgcaccgcggcagcgctcgat
gcggcggcacgtgcggcacgccagcgcgaggccgagcaggagatccacggcgatccgttc
gtccagcagctcgtccgtgatttcggcgcgcgcatcgtcgaaggctcggtgcggccgctc
gccgattcggcgccggatggcgcgccgccgacgctgcattga
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