Burkholderia ambifaria MC40-6: BamMC406_6341
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Entry
BamMC406_6341 CDS
T00684
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BamMC406_6341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bac03400
]
BamMC406_6341
DNA repair and recombination proteins [BR:
bac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BamMC406_6341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Luciferase_N
DUF3284
Motif
Other DBs
NCBI-ProteinID:
ACB68773
UniProt:
B1Z4W0
LinkDB
All DBs
Position
3:complement(945756..946763)
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AA seq
335 aa
AA seq
DB search
MAPRMIWKGAISFGLVHVPVQLFPATRTVKPSFRLLDKRSMDPVGYRQINKRTGKEVTRE
DIVRGYEYEKERYVVLTDEEIRAANPESTQTVDILTFVDADAVSFLYLDTPYYLVPDRKG
EKVYALLRDALKDSGKIGIALVVMRDRQHLGALIPVGPLLALDTLRWQEELRPLDELSVP
TEDAKRAGVTARELTMAKKLIDDMAGKWTPDEYHDTFRDDILELVERKVRSGKIEEIEDR
PAQTGRAATNVVDLTELLKRSLKGGGGARASDLRDERAEEEAETSPPAGARRKPAAKSAS
KGAATKTAAKRPATKRAATGEHAAKKTAVRRKHAA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgcggatgatatggaaaggcgcgatcagtttcgggctcgttcacgtgcccgtg
cagctgttcccggcgacacgcaccgtgaagccgtcgttccggctgctcgacaagcgctcg
atggatccggtcggctatcggcagatcaacaaacgcaccggcaaggaggtcacgcgcgag
gacatcgtgcgcggctacgagtacgagaaggagcgctacgttgtactgaccgacgaagag
attcgcgcggcgaatcctgaatcgacgcagacggtcgacattctgaccttcgtcgacgcg
gacgcggtgtcgttcctgtatctcgacacgccgtactacctcgtgccggaccgcaagggc
gagaaggtctatgcgctgctgcgcgacgcgctgaaggacagcggcaagatcggcatcgcg
ctcgtcgtgatgcgtgatcgccagcatctcggcgcgctgattccggtcgggccgctgctc
gcgctcgacacgttgcgctggcaggaggagctgcgcccgctcgacgaactgtcggtgccg
acggaagacgcgaagcgcgcgggcgtgaccgcgcgcgagctgacgatggcgaagaagctg
atcgacgacatggcgggcaagtggacgcccgacgagtatcacgacacgttccgcgacgac
atcctcgaactggtcgagcgcaaggtgcgctcgggcaagatcgaggaaatcgaggaccgg
ccggcgcagacgggccgcgccgcgaccaacgtggtcgacctcaccgaactgctcaagcgc
agcctgaagggcggcggcggcgcgcgcgcgtcggacctgcgcgacgaacgcgcggaagag
gaggccgagacgtcgccgccggccggcgcacgtcgcaagccggccgcgaaatccgcgtcg
aaaggcgcggccacaaagaccgcggcgaagcggccggccacgaaacgcgcggcgacgggc
gagcatgcggcgaagaaaaccgccgtgcgccgcaagcacgccgcatga
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