Bifidobacterium actinocoloniiforme: AB656_02170
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Entry
AB656_02170 CDS
T04036
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bact
Bifidobacterium actinocoloniiforme
Brite
KEGG Orthology (KO) [BR:
bact00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bact03009
]
AB656_02170
Enzymes [BR:
bact01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
AB656_02170
Ribosome biogenesis [BR:
bact03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AB656_02170
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF6688
S4_2
Motif
Other DBs
NCBI-ProteinID:
AKV55243
UniProt:
A0A086Z0G4
LinkDB
All DBs
Position
complement(537620..538393)
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AA seq
257 aa
AA seq
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MPHPYSRAMKAHEASDEGVRLQKVLAQAGFGSRRKCEQIITEGRVEVDGALVTELGSRVD
PDKQQVKVDGSRIHISGKHVTLALNKPRKVLSAMDDPKGRYTLRDIIGDRYERVFHMGRL
DYDSEGLILMTDDGELAQHVMHPKYEVEKTYMATVRGKLGGNVCRRLVTQGVLLNDGLIK
LDHCAIVDRSRDHTMVKVILHSGKNRIVRRIFDAAGYPVSRLVRTQIGPIRLGDVKPGSY
RVLSRAEIMALDKEVGL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgccacatccatacagccgcgccatgaaggcgcacgaagcttccgatgaaggggtccgc
ctgcaaaaggtcctggcccaagccggtttcggatcgcgccgcaaatgcgagcaaatcatc
accgaaggccgggtcgaggtggacggggctctggtcaccgagctgggcagccgcgtggac
cccgacaagcagcaggtcaaggtggatggttcgcgcatccacatctccggcaagcatgtc
accctggctttaaacaagccacgcaaggtcctgtccgctatggacgaccccaaaggccgc
tacaccctgcgcgacatcatcggtgaccgctatgaacgcgtcttccacatgggccgcctg
gactatgactcagagggtctgatcctgatgaccgacgacggcgagctcgctcagcatgtc
atgcaccccaagtacgaggtggagaagacttacatggccaccgtgcgcggcaagctgggc
ggcaacgtctgccgccggctcgtcacccagggtgtgctcctcaacgatgggctgatcaaa
ctggatcattgcgcgatagtggaccgctcacgcgatcacacgatggtcaaagtgatcctg
cactcagggaagaaccgaatcgtcaggcgcattttcgacgcggccggttacccggtctcg
cgcctggtgcgcactcagatcggccccatccgcttgggcgacgtcaagccgggttcctac
cgggtcctctcccgggcagaaatcatggccttggacaaggaggttggactgtga
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