Balaenoptera acutorostrata scammoni (minke whale): 103011820
Help
Entry
103011820 CDS
T03086
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103011820 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacu03400
]
103011820 (LIG4)
Enzymes [BR:
bacu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103011820 (LIG4)
DNA repair and recombination proteins [BR:
bacu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103011820 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
103011820
NCBI-ProteinID:
XP_007196834
UniProt:
A0A384BC16
LinkDB
All DBs
Position
Un
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFKEFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLTIQQVNDILDSIANNNAAQRKDLVKKSVLQLITQSSA
LEQKWLIRMIVKDLKLGFSQQTVFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLATIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYED
QFGSSPQEGSLTPFIHNTFKTDVQNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNDKKLGQETLRKRYEILNSVFMPIPGRIEIVQKTQAHTKKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVSEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHRKAPPSCILC
GTEKPEVYIEPWNSVIVQVKATEIVPSDMYKTGCTLRFPRIEKIREDKEWHECTSLEDLE
QLRGKASGKLASKHLYVGDDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLSNVNKVSNIFE
DVEFCVMSGTNSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSDKHDV
VKPEWLLECLETKSCVPWQPRFMIHMCPSTKQHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNAGEQTPREMGPVIADLEHRYSWDNTPLSMFRHHTIYLDLYTVINDLNTKIEGARLAI
TALELQFHGAKVVSCLAEGVSHVIIGEDQSRVADFKAFRRTLKRKFKILQERWVTESIDK
SELQEENQYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacttcacagactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagaaaagtaaaggacgtgcagaaaaaatcagacacttcaaa
gaatttttagattcttggagaaagtttcatgatgcccttcataagaaccaaaaagatgtc
acagattctttttatccagccatgagacttattcttcctcagctggaaagagagagaatg
gcctatggcatcaaagaaactatgcttgctaagctttatattgaattgcttaacttacct
cgagaaggaaaagatgccctcaaacttctaaactacagaacacctaccggaactcgtgga
gatgctggagactttgcgatgattgcgtactttgtgttgaaacccagatgtttacagaag
ggaagtttaaccatacagcaggtaaatgacattttagactccattgccaacaataatgct
gcccaaaggaaggacctagtaaagaagagtgttcttcagcttataactcagagttcagca
cttgaacaaaagtggctgatacggatgattgtaaaggacttgaagcttggttttagtcag
caaactgtattttctgtttttcataatgatgctgctgagttgcataatgtcaccacagat
ctggaaaaggtctgtaggcaactgcatgatccttcagttgggctcagtgacatttctatc
actttattctctgcctttaaacccatgctggccactatagcagatatcgagcgaattgag
aaggacatgaaacaccagagtttctacatcgaaaccaagctagatggtgagcgtatgcaa
atgcacaaggatggggacgtgtatcggtacttctcccgcaatggatataactatgaggat
cagtttggttcttccccacaggaaggttcccttacaccgttcatccataatacattcaaa
acagatgttcaaaactgcatccttgatggtgagatgatggcctataaccctaatacacaa
acttttatgcaaaaggggaataagtttgatattaaaagaatggtagaagattctgatctg
caaacttgttactgtgtttttgatgtattgatggttaatgataaaaagctagggcaggag
acactgagaaagaggtatgaaattcttaatagtgtttttatgccaataccaggtagaata
gaaatagtgcaaaaaacacaagctcatactaagaaagaagtaattgatgctttgaatgaa
gcaatagataaaagagaagaggggatcatgataaaacatcctctgtccatttacaagcca
gataaaagaggtgaaggatggttaaaaattaaaccagagtatgtaaatggactgatggat
gaactggacatcttaattgtggggggctactgggggaaaggttcccggggtggaatgatg
tctcattttttgtgtgcggtgtcagagaaacccccttctggtgaaaaaccatcagtgttt
catactctctgtcgtgttggctcaggttacaccatgaaagaactgtatgacctgggtttg
aagttggccaaacactggaagccttttcataggaaagctccaccaagttgcattttatgt
ggaacagagaagccagaggtctacatcgaaccttggaattcggtcattgttcaggttaag
gccacagagatcgtccccagtgatatgtataaaactggctgcacgttgcgttttccacga
attgagaagataagagaagacaaagaatggcatgaatgtacatctctggaggacttagaa
caacttcgagggaaagcctccggaaagcttgcgtctaaacacctttatgtgggtgatgat
gatgaaccacaagaaaaaaagcggaaagctgccccaaagatgaagaaagttattggaatt
attgagcacctaaaagcacccaacctttctaacgtaaacaaagtttctaatatatttgaa
gatgtggagttttgtgtcatgagtggaacaaacagccatccaaagccggatctggagaac
agaatcgcagaatttggtggttacatagtccaaaatccaggcccagacacatactgtgtg
attgcagggtctgagaacattcgagtgaaaaacatcatctcttctgataaacacgatgtt
gtcaagccggagtggctgctagagtgtttagagaccaaaagctgtgtgccgtggcagcct
cgcttcatgatccacatgtgcccgtcaacaaaacagcacttcgcccgggaatacgactgc
tacggggatagttactttgtcgatacagatttgaaccaactgaaggaagtgttctcggga
attaaaaatgctggtgaacagactcctagggaaatgggtcctgtgattgccgatttggaa
caccggtattcctgggacaacactcctcttagcatgtttcgacaccacaccatttatttg
gacttgtatactgttattaatgacttaaatactaaaatcgagggggcaagattagctatc
acagccctggagcttcaatttcatggagcaaaagtagtttcctgcttagctgagggagtg
tctcatgtcatcattggggaggatcagagtcgggttgcagactttaaagcttttcgaaga
actcttaagagaaagtttaaaatcctacaagaacgttgggtaactgaatcaatagacaag
agtgaactacaggaggaaaatcaatatttggtttga
DBGET
integrated database retrieval system
