Bifidobacterium adolescentis ATCC 15703: BAD_0356
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Entry
BAD_0356 CDS
T00437
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bad
Bifidobacterium adolescentis ATCC 15703
Brite
KEGG Orthology (KO) [BR:
bad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bad03016
]
BAD_0356 (truB)
Enzymes [BR:
bad01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BAD_0356 (truB)
Transfer RNA biogenesis [BR:
bad03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BAD_0356 (truB)
Prokaryotic type
BAD_0356 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BAF39137
UniProt:
A1A0A4
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All DBs
Position
447936..449006
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AA seq
356 aa
AA seq
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MTTKPDNSGLLVIDKPQGVTSHDVVAAVRGALHMKRVGHAGTLDPMATGVLVVGFGNATR
LLNYIVDHDKTYLATIRLGQRTTTDDADGELLPGEGTIAEFPSRQTVEDVIAHHFTGRIE
QVPNSYSAIKINGQRAYDLAREGKDVDLKARPVTISEFSVSAVRYGYASTTCAGSPLADA
IEIAPEESWHAETDGQNEPNMQPVMELDVTVTCSAGTYIRALGRDLGAELGLGGHLTMLR
RIRVGRFSVNMPNVMTAHTEAKTFTNREGIEVTRNRAVLDDAEHAVDHALDLVASAAASM
DMLPVTEQEATDLRFGRRIAHDIHTTMAAYVPETNDLVAIVERAKRGETKPVAVFN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaagcctgacaactccggtctgctggtcatcgacaagccgcagggcgtcacc
agccacgatgtggtcgcggcggtgcgtggcgccctgcacatgaaacgcgtcggccatgcc
ggcacgctcgacccgatggccaccggcgtgctggtggtcggcttcggcaacgccacacgt
ctgctcaactacatcgtcgaccacgacaaaacctacctggccaccatcagactcggccag
cgcaccaccacggacgacgccgacggcgaactgctgccgggggagggaactatcgccgaa
ttcccttcacgacagaccgttgaagacgtcatcgcccatcatttcaccgggcgcatcgag
caggtgccgaactcctattcagccatcaaaatcaacggccagcgcgcctatgatctggcc
cgagaaggcaaggatgtggacctcaaggctcgtccggtgaccatctcggaattcagcgtt
tcggcagtgcgatacggctatgcttcgaccacatgcgcgggatcaccgcttgccgatgcc
atcgaaatcgccccggaggaatcctggcatgccgaaaccgacgggcaaaacgaaccgaac
atgcagccagtcatggaactcgacgtgaccgtgacctgctcggccggcacctacatccgc
gcactcggccgcgatctgggcgccgaactcggcctcggcggccatctgaccatgctgcgc
cgcatccgcgtcgggcgtttctcggtgaacatgccaaacgtcatgaccgcccatacggaa
gccaaaaccttcaccaaccgcgaaggcatcgaagtgacacgcaaccgtgcggtgcttgac
gatgccgagcatgccgttgaccacgcactcgacctggtcgccagcgcggccgcttccatg
gacatgcttcccgtcaccgaacaggaggcgacggacctgcggttcggccgtagaatcgcc
cacgacatccatacgaccatggccgcgtacgttcccgaaaccaacgatctggtggcgatc
gtggaacgcgccaaacgtggcgagaccaagccggtcgcggtcttcaactga
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