Bifidobacterium adolescentis 22L: BADO_1008 Help Entry BADO_1008         CDS       T03260                                  Name (GenBank) NAD-dependent DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism badl  Bifidobacterium adolescentis 22L Pathway badl03030   DNA replication badl03410   Base excision repair badl03420   Nucleotide excision repair badl03430   Mismatch repair Brite KEGG Orthology (KO) [BR:badl00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     BADO_1008    03410 Base excision repair     BADO_1008    03420 Nucleotide excision repair     BADO_1008    03430 Mismatch repair     BADO_1008  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:badl03032]     BADO_1008    03400 DNA repair and recombination proteins [BR:badl03400]     BADO_1008 Enzymes [BR:badl01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      BADO_1008 DNA replication proteins [BR:badl03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      BADO_1008 DNA repair and recombination proteins [BR:badl03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      BADO_1008    NER (nucleotide excision repair)     GGR (global genome repair) factors      BADO_1008    MMR (mismatch excision repair)     DNA ligase      BADO_1008   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       BADO_1008 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT HHH HHH_3 UPF0758_N Motif Other DBs NCBI-ProteinID:  AII76425 UniProt:  A0A076JMH2 LinkDB All DBs Position complement(1235624..1238296) Genome browser AA seq 890 aa AA seqDB search MTNRDDSEQLAWDFDTPESDGSSAAVVADEGLASLTPGSERWIAALQPTDADAMRLDKVD VASMSAEAAARLWARVAAWVESDQIAYYIDDAPVSSDAAYDARLRCLQSLEAQFPSLDSP QSPTHRVGGTFSNDFASVRHPSRMMSLDDVFSIEELREWYDGVLRGLDWPESKPLPMTCE VKIDGLALNLIYRNGVLEQGLTRGDGVTGEDITLNVRTISTIPQNLAGPEEDIPEFVEIR GEVFMRWDDFNKLNAENEDAGRAPFANPRNAAAGSLRQKDPRITATRRLSFYAHGIGSLR WGAGHAGNGHDVVNDQSEAYELYKKWGVPVSPHNREVTSFKEILDMIDYYGEHRGDIEHA LDGIVVKVDDLGLQRSLGATSRAPRWAIAYKYPPEEVNTELLDITVQVGRTGRVTPVAVL KPVYVAGSTVSRTTLHNPFEVERKGVLIGDTVVVRKAGDVIPELVGPVLERRKGREGELR RFVMPTRCPSCGAELAPAKEGDKDIRCPNVESCPAQLTERIINLASRKAFDIEHLGDQSA IALTNPEEDRPDSIDTYAPNITEIVVKPGEEPEPYEPVAGLELPPMQTPVLSSEAGLFSL TSADLKDVRVWREAPIIEIHEIVGSNGKIKKVRKRVGGSGLWHQVPAFWTAPTAARKRKE ADIDETAEYPQYVVPDDAVVIREEIKVSRGGASSVQPVYIRPAENTRKMLDEMDKARHAD LWRVLVALSIRRLGPPTARTIASAFGTLDAIEHASVDELSQIDGIGPEIAESVVTWFTAA REPGNWRGAVLDAWKAAGVGVGQAQASGLPQTLAGKTVVVTGSLEGFSRDSAKEAIVLRG GKAAGSVSKKTDWVVVGENAGSKAAKAEELGIPMLNEDQFKQLLDTGTVE NT seq 2673 nt NT seq  +upstreamnt  +downstreamnt atgacgaatcgtgatgattccgaacagttggcatgggatttcgacacgccggagagcgac ggtagttccgcggccgtcgtggccgatgaggggctggcttcgctgactccgggcagcgaa cgttggattgccgcgttgcagccgaccgatgccgacgccatgcgcctcgacaaggttgat gtggcttcgatgagcgccgaagccgcggccaggctgtgggcgcgcgtggccgcatgggtg gaatcagaccagatcgcatactatatcgacgatgcccccgtctcatccgacgcggcatat gacgcaagattgcgctgcctgcaatcgcttgaggcgcagttcccatcacttgactcaccg cagtcaccgacccatcgcgtgggcggcacgttctccaacgacttcgcttccgtacgtcat ccatcgcgcatgatgagcctcgatgacgtgttctccatcgaggagctgcgcgaatggtac gacggcgtgctcaggggattggattggcccgaatcgaagccgctgcccatgacctgcgag gtgaaaatcgacggtcttgcgctgaacctcatctaccgcaacggcgtgcttgaacagggt ctgaccagaggcgatggcgtgaccggcgaggacatcactctcaacgtgcgcaccatctcc accattccgcagaaccttgccggaccggaggaagacattcccgaattcgtggagatccgc ggcgaagtgttcatgcgatgggacgatttcaacaagctgaacgccgagaacgaggacgcc ggtcgtgcgccattcgccaatccccgcaacgcggccgcaggtagtctgagacagaaggat ccgcgtatcaccgcaacccgtcgcctgagcttctacgcgcacggcatcggatcgctgcgt tggggtgcggggcacgccggcaacggccatgatgtggtcaacgaccaatccgaagcctac gaattgtataagaaatggggtgtgcccgtctctccgcacaaccgtgaggtcacgtcgttc aaggaaatcctcgacatgatcgactattacggcgaacaccgaggcgacatcgaacacgcg cttgacggcatcgtcgtgaaggtcgacgatttgggattgcagcgttcccttggcgccaca tcgcgtgcgccgcgctgggccatcgcctacaaatatccaccggaagaagtcaataccgag ctgcttgacatcactgtgcaggtggggcgcaccggacgtgtgactccggtggcggtgttg aaacctgtgtacgtggccggttccacagtatcccgtaccacgctgcacaacccctttgaa gtggaacgcaaaggcgtgctcatcggcgacaccgtggtggtgcgcaaggcgggagacgtg attcccgagctcgtcggtccggtgctggagcgacgcaagggacgcgagggcgagctccgc cggttcgtgatgcccacgcgttgcccgagctgcggcgcggaactcgctcccgccaaagag ggagacaaagatatacgctgcccgaacgtggaatcctgcccggcgcagctgaccgagcgg atcatcaatctggcgtcccgcaaggcgttcgatatcgaacatctgggcgaccaatcagcc attgcgctgacgaatcccgaagaggacaggcccgattccatcgacacgtatgcgccgaac atcaccgaaatcgtggtgaaacccggtgaggagcctgaaccgtacgagccggtggcggga ctggaactgccgcccatgcagacacctgtgctgtccagcgaggccgggctgttctcgttg acgtccgcagacctcaaggatgtgcgcgtctggcgcgaggccccaatcatcgaaatccac gagatcgtcgggtcaaacggcaagatcaagaaagtgcgcaaacgtgtgggcggatccgga ttatggcatcaggtgcccgcattctggaccgcgcctaccgctgcccgcaaacgcaaggaa gccgacatcgacgagaccgcggaatatccgcaatacgtggtgccggatgacgccgtggtg atccgcgaggaaatcaaggtatcccgtggaggcgcgtccagcgtgcagccggtgtacatt cgtccggcggaaaacacccgcaagatgctcgacgaaatggacaaagcccgccatgccgac ctgtggcgcgttctggtggccctgtccatccgcaggctcggaccgcccaccgcacgcacc atcgccagcgcgttcggtacgttggatgccatcgaacatgccagcgtggacgaattgtcc caaatcgacggtattggtccggaaattgcggaatccgtagtcacatggttcaccgcggcc cgtgagccgggcaattggcgcggtgccgtgcttgacgcatggaaggccgccggcgtagga gtcggacaagcccaagccagcggactaccacagacattggcaggcaaaacggtcgtggtc accggctcgttggaaggattctcccgcgattccgccaaagaggccatcgttctgcgcgga ggcaaagccgcaggatccgtcagcaagaaaaccgattgggtcgtcgtaggcgagaatgcc ggctcaaaagccgcaaaagccgaggaactgggcatccccatgctcaacgaagaccaattc aaacagctgctcgacacgggaacagttgaataa

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