Bifidobacterium adolescentis BBMN23: BBMN23_0186
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Entry
BBMN23_0186 CDS
T03774
Name
(GenBank) putative DNA polymerase III delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bado
Bifidobacterium adolescentis BBMN23
Pathway
bado03030
DNA replication
bado03430
Mismatch repair
bado03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bado00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBMN23_0186
03430 Mismatch repair
BBMN23_0186
03440 Homologous recombination
BBMN23_0186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bado03032
]
BBMN23_0186
03400 DNA repair and recombination proteins [BR:
bado03400
]
BBMN23_0186
Enzymes [BR:
bado01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBMN23_0186
DNA replication proteins [BR:
bado03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBMN23_0186
DNA repair and recombination proteins [BR:
bado03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBMN23_0186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
AAA_16
AAA_18
AAA_22
RuvB_N
NolB
TniB
Mg_chelatase
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJE05158
LinkDB
All DBs
Position
242659..243807
Genome browser
AA seq
382 aa
AA seq
DB search
MSVWNSIVGQAQVVEQLKAIASGDPKAIAQSWLICGPPGSGRSNVARAFAAALESPDHGL
NDEPTKTTEQVLAGTHPDVSVLATNKVTIGIDEVRDIITTSEQMPGTAPWRIIIIEDVDR
MMERTTNVLLKEIEEPSPHAIWLLCAPSAQDVLPTIRSRTRIVNLAVPSNQAVAKFLESQ
GFEPNIAARAARLSEGHIGIASLYAKDERVMTDRDELIVGVLGLHRASDAVLLAGNLIDN
AKAQAEAEVNVKASEAEADFRRINGLGPKDRIPPKLRGAYNAIAKKDELKRRATRLTRDV
LDRALNSVASIYRDVAVLQNNAEDAVGLINLENRSAITELSVRLDRTGAVRRLENIATAR
RRLNGNGNPVLVFEALFCALIP
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgtggaactccatagtaggccaagcgcaggtggtcgaacagctgaaggccatc
gccagcggcgacccgaaggccatcgcgcagtcgtggctgatttgcggccctcccggatcg
ggccgttccaacgttgcccgcgcgttcgccgccgcgctcgaaagccccgatcatggcctg
aacgatgagccgaccaaaaccaccgagcaggtgcttgccggcacccaccccgacgtgagc
gtgctggccaccaacaaagtgaccatcggcatcgacgaggtgcgtgacatcatcaccaca
tccgagcagatgcccggcaccgcgccgtggcgcatcatcatcatcgaagacgtcgaccgc
atgatggaacgcaccaccaacgtgctgttgaaggaaatcgaagagccgagcccgcacgcc
atctggctgctgtgcgcgcccagcgcccaagacgtgctgccgaccatccgctcgcgcacg
cgcatcgtcaacctggccgtaccgtccaaccaggcggtggcgaaattcttggaatcgcaa
ggtttcgagccgaatatcgcggcgcgtgcggcacgattgtcggaggggcacatcggcatc
gcgagcctgtatgccaaggacgaacgcgtcatgacggaccgcgacgagctcatcgtcggc
gtgctcggcttgcatcgcgcgtcggacgccgtgctattggccggcaacctcatcgacaac
gcgaaggcgcaggccgaagcggaagtcaacgtcaaagcgtccgaagcggaagccgatttc
cgccgcatcaacgggctcggacccaaagaccgcatacccccgaaactgcgtggcgcatac
aatgcgatcgccaaaaaagacgagctcaaacgacgcgccaccagactcacgcgtgacgtg
ctcgaccgtgcgctcaattcggtcgccagcatctaccgtgacgtggcggtactgcagaac
aacgccgaggacgcggtgggactcatcaacctcgaaaaccgttccgccatcacggaattg
tcggtacggctcgaccgtacgggggccgtgcgccggctggagaacatcgccaccgcgcgc
cgcaggctcaatggcaacggcaatccggttttggtgttcgaagcgctgttctgcgcgctg
attccatga
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