Bifidobacterium adolescentis BBMN23: BBMN23_1240
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Entry
BBMN23_1240 CDS
T03774
Name
(GenBank) putative transcriptional repressor in the Rok (NagC/XylR) family
Organism
bado
Bifidobacterium adolescentis BBMN23
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
HTH_24
MarR
MarR_2
HTH_Crp_2
TCR
HTH_AsnC-type
Rrf2
HHH_5
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
AJE06212
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Position
1428227..1429429
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AA seq
400 aa
AA seq
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MSRYSAQQSSISENNRSRILQYLYHNGICSRAQIAKAIKLTPAAITKITAKLLAQGIIEE
TGDMDGDKNRRSIGLNLNCAKYHIIGVKFARSLVQIAVFDLKCNRIFLSDLPTVSEEHIP
ETVERIRDTVRQLIKDDPSIVAVGMAVPGPYLKDEGRTALVSSMQGWRQINFIDEFSNAF
SVPVFVEQDARAGALAQFLLNPELSEGSLAYYLLGEGIGLGVIDNGTIYYGEHGTATEIG
HVSIDVNGKPCDCGNVGCLERYCSANAIHERLNANPSIVPGCETMTHAQACAALFAKANA
GDETATLLMRDVARYVGYGAVTIINAFNPTHIVLGDIIAQAGQPLLDEVTQVVRERTIPE
IGRNTRITLSALPTDATVTGAAAVAITNFLEHPSMFFDVA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggtacagcgcccaacagtcatcgatctcggaaaacaaccgttcccgtatcctg
caatacctgtaccacaatggcatctgctcacgcgcgcagatcgccaaagccatcaagctc
actccggcggcaatcaccaaaatcaccgcgaaactgctggcgcagggcatcatcgaagaa
accggcgacatggacggagacaagaaccgccgttccatcggtctgaatctcaattgcgcc
aaataccacatcatcggcgtgaagttcgcccgcagtctggtgcaaatcgcggtcttcgac
ctcaagtgcaaccgtatcttcctgtccgacttgcctaccgtcagcgaggagcacatcccc
gaaacggtggagcgcattcgagataccgtacgccagctcatcaaggacgaccccagcatc
gtggccgtcggcatggcggttccggggccctatttaaaggacgaaggacgcaccgctttg
gtctcctccatgcagggctggaggcaaatcaacttcatcgacgaattcagcaacgcattc
agcgtccccgtgttcgtcgaacaggacgcccgcgccggcgcgctggcgcagttcctgctc
aatccggaactgtcggaaggttccctcgcctactatctgcttggcgaaggcatcggcctc
ggagtcatcgacaacggcaccatctactacggcgagcacggcaccgccacggaaatcgga
cacgtctccatcgacgtgaacggcaagccatgcgactgtggcaatgtcggctgcctggaa
cgctactgctccgccaatgccatccacgaacggctcaacgccaatccgagcatcgttccc
ggatgcgagacgatgacgcatgcgcaggcttgcgcagcactgttcgccaaggcgaacgcg
ggagacgagaccgcaacgcttctgatgcgcgatgttgcccgatacgttgggtacggcgcg
gtcaccatcatcaacgctttcaatccgacacacatcgttcttggagacatcatcgcgcaa
gccggccagccgttgctcgacgaagtcacacaagtcgtgcgcgaacgcacgatccccgaa
atcgggcgcaacacccgaatcaccctgtccgccctgcccaccgacgccaccgttaccggt
gccgccgccgtggccatcaccaattttctggaacatccttcgatgttcttcgacgtcgca
tag
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