Bombus affinis (rusty patched bumble bee): 126914648
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Entry
126914648 CDS
T09368
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03022
Basal transcription factors
baff03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126914648
09124 Replication and repair
03420 Nucleotide excision repair
126914648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126914648
03400 DNA repair and recombination proteins [BR:
baff03400
]
126914648
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126914648
DNA repair and recombination proteins [BR:
baff03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126914648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
VWA
DZR
Motif
Other DBs
NCBI-GeneID:
126914648
NCBI-ProteinID:
XP_050574786
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All DBs
Position
1:complement(16604381..16607204)
Genome browser
AA seq
400 aa
AA seq
DB search
MADEEEEKEYRWETGYEKTWEAIKEDDHGLLEASVADIIHNAKRKRQMEKKVGARLGMMR
HLYVILDASESMSLQDLKPTRFLCSLKLLEDFIEEFFYQNPISQLGVIITRNKRAEKVSE
LAGNSKKHVKEVQNMQQIAPVGEPSLQNSIELALKSLRLLPSHASKEILIIVGALTTCDP
GDINETIQNMKTDSVRCSVIGLAAELYICKRMATATGGEHGVALDDKHYKEQLNMHIDPP
PAATRLDAALVKMGFPHHALHSSANDSAMAVCMCHAESSDESVKLLSTGYLCPQCLSKHC
ELPVECRACGLTLVSAPHLARSYHYLFPVESFKEVVFSGTPSTCYGCQKILSQKDKKVYI
CNKCNETFCLDCEIFIHESLHTCPGCATNPDTYQKSTDRN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaagaagaggagaaagagtatagatgggagactggttatgaaaagacatgg
gaagcaatcaaagaagatgatcatggattgttggaagcatcagttgcagatattattcac
aatgccaaaagaaaacgtcaaatggaaaagaaggttggtgccagattagggatgatgaga
cacctttatgtaattcttgatgcttctgaatcaatgtcacttcaagatttaaaaccaact
cgttttctatgttccttaaagctattagaagattttattgaagaattcttttatcaaaat
cctataagtcagttaggagtaattatcacaaggaataagagagcagaaaaagtaagcgaa
ttagctggaaattctaaaaaacatgtgaaggaagtacagaacatgcaacaaattgcacca
gtaggtgaaccttcattgcaaaactccatagagttagctttgaagtcattacgtctccta
ccatcacatgctagcaaagaaatacttataatagtaggagcacttacaacatgtgatccg
ggagatatcaatgaaactatacaaaacatgaagacagattctgtcaggtgcagtgtgata
ggtttggctgctgaactatatatttgtaaaagaatggcaacagcaactggtggagagcat
ggtgttgcattggatgataaacattacaaggaacagttaaatatgcacatagatcctcct
ccagctgcaactaggttagatgctgctcttgtaaaaatgggttttcctcatcatgcatta
cattcttctgcaaatgattcagctatggcagtttgcatgtgtcatgcagaaagttcagat
gaatctgttaaacttcttagtacagggtatctttgtcctcagtgtttgagcaaacattgt
gaacttccagtagaatgcagagcatgtggattaacattggtgtctgctccacatttagca
cggtcctatcattatttattccctgttgaatcttttaaggaagttgtattcagtggaact
ccttcaacctgttatggttgtcagaagatattatctcaaaaagataagaaggtatacatt
tgtaataaatgtaatgaaacattttgtttagactgtgaaatatttattcatgaatcttta
catacatgtcctggctgtgctactaatccagatacatatcaaaagtccacagataggaat
taa
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