Bombus affinis (rusty patched bumble bee): 126916261
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Entry
126916261 CDS
T09368
Name
(RefSeq) neurogenic locus Notch protein isoform X1
KO
K02599
Notch 1
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04320
Dorso-ventral axis formation
baff04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
126916261
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
126916261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
Ank
Notch
Ank_4
NOD
EGF_3
NODP
Ank_5
Ank_3
EGF_2
DL-JAG_EGF-like
C8A_B_C6_EGF-like
Presenilin
Motif
Other DBs
NCBI-GeneID:
126916261
NCBI-ProteinID:
XP_050577798
LinkDB
All DBs
Position
5:17811871..17990617
Genome browser
AA seq
2506 aa
AA seq
DB search
MCVDKIHGIMLPQRKLDYASMACFLLPLLILVFFPAVSGFVSCSPSPCKNEGVCVSSPRG
ESHCKCTSKYVGEYCQHLNPCHTGPRCQNGGSCRVKESSGGGTPSFTCSCPVGFTASLCE
IPIENACDSSPCLNGATCNLKSLREYVCTCATGYTGEHCERQDHCASSPCRNGAECLSLE
DSYKCTCAPGFTGPNCADDIDECDRNPCRHGSCKNIHGSYKCMCSSGYTGQNCENEYIPC
DPSPCKNGGTCHQIDGLDYQCICPEGFRGDQCEENIDDCPGNLCQNGATCMDRINEYSCL
CPPSYTGTQCELDVDECSVRPSLCHNGATCTNSPGSYSCICVNGWTGPDCSVNIDDCAGA
ACFNGATCIDRVGSFYCQCTYGKTGLLCHLDDACTSNPCHEGAICDTSPINGSFACSCAT
GYKGVDCSEDIDECEQGSPCEHDGICVNTPGSFACNCAQGFTGPRCETNVNECESHPCQN
DGSCLDDPGTFRCVCMPGFTGTQCEIDIDECAAKPCLNRGVCTDLINSFKCNCANGFAGS
HCQINIDDCASSPCKNGGICQDSIAKYTCDCPPGFTGASCETNINDCQSNPCHSGTCIDG
ENSFSCNCFPGFTGKLCQTQIDECESNPCQFGGRCEDRINGYQCICRPGTSGTNCEVNVN
ECYSNPCRNGAKCIDGINRYSCECEPGFTGQHCETDINECASNPCANGGRCIDLINGFRC
DCPRGYYDARCLSDVDECASNPCVNGGTCEDGVNQFICHCLPGYGGKRCEADIDECGSNP
CQHGGTCNDHLNGYSCKCLAGYAGTNCETNIDDCADNPCQNGGSCIDLVNDYKCVCELPH
TGRNCEDKLDPCSPNKCLHGAKCSPSSNFLDFACTCTVGYTGRLCDEDVDECVMTSPCRN
GATCRNTNGSYQCLCAKGYEGRDCIINTDDCASFPCQNGGTCLDGIGDYTCLCVDGFSGK
HCEIDVDECLSQPCQNGAICKEYVNSYTCQCQLGFSGINCQTNDEDCTDSSCMNGGKCID
GINNYTCVCKPGYTGSNCQYRINECDSLPCLNGATCHDHVQYYTCHCPYGYTGARCDQYV
DWCADNPCENQATCVQHKNKYQCNCSPGWTGKVCDVEMVSCKDAAIRKGVPEKSLCNNGT
CEDIGNSHRCHCLEGYTGSYCQEEVNECDSAPCQNGATCKDLVGSYQCQCTKGFQGQNCE
LNVDDCRPNPCQNGGTCHDLISNFSCSCPPGTLGFICELNVDDCAVGTCHNNGTCTDKVG
GFECKCPPGFVGPRCEGDINECLSNPCSSPGTQDCVQLVNNYHCNCKPGYMGRHCEVKVN
FCDSSPCQNGGVCTAKQAGHTCLCPSDYYGNNCEFAGSYCDREPCLNGGTCRVAETDVGY
RCYCPPGTTGTHCEIDARDECASNPCQQSNAVCKNLLGDYACDCPPKWTGKNCEIYDPNY
GGGIFGSPSSNIPKIMNAYDLDLELERKKCIENRCEEKSGNHHCDEECNRYACNFDGNDC
SLGINPWRNCTAPINCWDVFMNDVCDEVCNNAQCLFDGRDCERKLAPCNPIYDAYCRKHY
ANGHCDYGCNNEECNWDGLDCDREPPSLAEGVISVVVRMDMQTFRSNVVAFLRDIGHELR
TTLRVKQDELGNDMIYPWKRERDPGMRTNFFGRPTTIYTNTQSGVIAYLEIDNRKCTVTQ
GAVCFPSANEAAEYLAATASKHSLSRNFPIEQVRGVVGPQGPEYPDAPTNYKYVFIGIVI
VVLGGLLVGVLVTAQRKRAVGVTWFPEGFLRTNSGSGQRRRSRRRGPDGQEMRNLNKQPS
VNCMDLDVGNGRAQQWSDDESDLPPSKRMRAIEPGYASDHTAITDYEETEPRMWTQQHLD
AAEIRRPDAGVLTPPSLEHGQDVDARGPCGMTPLMVAAVRGGGLDTGEEEDESDGTAAVI
ADLVAQGADLNATTDKSGETSLHLAARYARADAAKRLLDAGADANSQDNTGRTPLHSAVA
ADAMGVFQILLRNRATNLNARMHDGTTPLILAARLATEGMVEDLINADADINAADNSGKT
ALHWAAAVNNVDAVNILLVHGANRDAQDDKDETPLFLAAREGSFEACKALLDTFANREIT
DHMDRLPRDVASERLHHDIVRLLDEHVPRSPQMVNVIPNGPLMGSPNHPQLITHPTVIGS
APKQAKSKKRPKAGTTGNPNSPESEGGVVVVRRKPSVKKPPAKRGAQPPNQEIPQGAEGA
EGNLPSPYDSASLYSNALPLVSHTATAKQPPPYEDCIKGQSMQGLQQLGLDTFTTNYGLP
NFHDQLLASHQRQAQGMVNTLSPPYSNQSPPHSVQSNMTLSPQASYMGSPSPAKSRPSLP
TSPTHIAAMRQATHQKHGGMPPVGFDFENLPYSSSQQQQQIQQTQQQIQQQQQQQQQQQQ
QQQQSTQQQQQQQQQQQQQQQQQQQQTQQYYQYLTPPSHHSGPDVTPQHLMQAPESFPTP
SPDSPGHWSSSSPHSNSDWSECMASPNAYGAGATHQSNKGSEAIYI
NT seq
7521 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtggataaaattcacggcatcatgttgccacaacgaaaattggattacgcatcg
atggcgtgttttcttttgcctctgctcatccttgttttctttcctgcggtgtccggtttc
gtgtcgtgttcgccgagcccctgcaaaaacgaaggagtttgcgtatcatcaccacgcggc
gagtcgcattgcaaatgcacgtcgaaatacgtgggagaatactgtcaacatctgaacccg
tgccacacgggaccacgctgtcagaacggtggttcgtgcagggtgaaggaaagtagcggg
ggtggcacaccttcgtttacctgttcctgtcctgtcggatttaccgcgagcctgtgcgag
ataccgatcgagaacgcgtgcgactcatctccgtgtttgaacggtgccacttgcaatctg
aaatcgctccgtgaatacgtttgcacctgtgccactggatacaccggcgagcactgcgaa
cgacaagaccactgcgcctcgtcgccttgtcgaaacggggccgagtgtctgtcgctggag
gacagctacaagtgcacgtgtgcacccggctttaccgggccgaattgcgcggacgacatc
gacgaatgcgacaggaacccgtgcagacatggctcctgcaagaacattcacggatcgtac
aaatgcatgtgctcgagcggatatactggccaaaattgcgagaacgagtatattccctgc
gacccatcgccgtgcaaaaatggaggcacgtgtcatcagatcgacggtttggattaccag
tgcatctgtcccgagggtttccgcggagatcagtgcgaggagaatatcgacgactgtcct
ggaaatttgtgccaaaacggcgcaacctgcatggacaggataaatgagtactcgtgccta
tgtcctccgtcgtacacaggcacgcagtgcgaactggacgtggacgagtgctcggttcgg
ccttcgttgtgccacaacggtgccacgtgtaccaattcacccggtagctactcgtgcata
tgcgtgaatggctggaccgggcctgactgcagcgtcaacatcgacgattgcgcaggtgcc
gcctgcttcaacggagctacctgcatcgatcgcgttggcagcttttactgtcaatgcacc
tacggcaagaccggattgctctgccatctcgacgatgcttgcacctcaaatccctgtcac
gagggtgcgatctgcgataccagtcccatcaatggatcgttcgcgtgttcctgtgcaacc
ggatataagggggtagactgctcggaggacatcgacgagtgcgagcaaggatccccttgt
gaacacgatggtatttgcgtaaacacacctggctctttcgcctgcaactgtgcacaagga
ttcacgggaccgagatgcgagacaaacgtgaacgagtgcgagtcccatccctgtcagaac
gacggctcgtgtctggacgatcctgggacctttcgttgcgtctgcatgcctggtttcact
ggcacccagtgcgagatcgacatcgacgagtgcgcggcaaagccatgcctgaacagaggc
gtctgcaccgacctgatcaattcctttaaatgcaactgtgccaacggatttgctggttct
cactgtcaaatcaatatagacgactgcgcctcgtcaccgtgcaagaacggcggtatctgt
caggattctatagccaagtacacgtgcgactgcccgccaggattcactggagcatcctgc
gaaaccaacatcaacgactgccaatcaaatccttgccacagcggcacttgcatcgatggc
gagaacagcttcagctgcaattgcttcccaggattcaccggcaaactgtgtcagacgcag
atcgacgagtgcgagagcaatccctgccaattcggaggaaggtgcgaagaccgtattaat
ggttaccaatgtatttgtagacctggcacgtctggaacaaactgcgaggtgaacgtgaac
gaatgttatagcaatccatgtagaaacggagccaagtgtatcgacgggatcaatagatac
tcgtgcgagtgcgagccaggattcaccggtcaacactgcgaaacggatatcaacgagtgc
gccagcaatccctgcgccaacggcggacggtgcatagatttgataaacggcttccggtgc
gattgtcctcgcggttactacgacgctagatgtttaagcgacgtggacgaatgcgccagc
aatccttgcgtgaacggtggcacttgcgaggacggtgtcaaccagtttatctgccactgt
ttgcccggttatggaggcaaaagatgcgaagcggacatcgacgaatgcggctcgaatcct
tgtcaacacggtggcacttgcaacgaccatctcaatggatacagctgcaagtgtctagct
ggatacgctggtactaattgcgagacaaatatcgacgattgcgcggacaatccttgccag
aacggcggttcttgcatcgacctcgtcaacgattataaatgcgtttgcgaattgccgcac
accggcaggaactgcgaggacaagctagatccttgttcacctaacaaatgtcttcatggc
gccaagtgttcaccatcctcaaatttcctcgatttcgcctgtacttgcacggtcggttac
actggcagactctgcgacgaggacgtcgacgagtgtgtaatgacctctccatgcagaaac
ggcgctacttgcagaaacaccaatggctcgtaccagtgcctttgtgcaaagggctacgaa
ggtcgggattgtatcattaacaccgatgactgcgcttcctttccctgtcagaatggtggc
acttgtttggacggtatcggcgactatacctgtctctgcgtagatggtttcagtggcaaa
cactgcgagatcgatgtagacgaatgtttgtcgcaaccatgccaaaacggtgcaatctgc
aaagaatacgtaaactcgtacacttgtcaatgtcaactcggattctccggtataaattgt
caaaccaacgacgaagattgcaccgacagtagctgcatgaatggcggtaaatgcatcgac
ggcatcaacaactatacctgtgtctgcaaacccggttacaccggttcaaactgccagtat
cgtatcaacgaatgcgacagtttgccctgtctgaatggagccacctgtcacgaccacgtt
cagtattacacttgccactgcccttacggatacaccggagccagatgcgatcagtacgtc
gactggtgtgcggataatccttgcgagaaccaggctacctgcgtccagcacaaaaataag
taccaatgtaattgttcccctggctggaccggcaaagtctgcgacgttgagatggtttct
tgcaaagacgcggctataaggaaaggagtgccggagaaaagcctgtgtaataacggtact
tgcgaggacataggtaatagtcaccgttgtcactgcctagaaggatacacaggttcttat
tgccaagaagaagtcaacgagtgtgactctgccccgtgtcaaaacggtgccacttgcaag
gatctcgttggatcttatcaatgtcagtgtacgaaaggtttccaagggcagaattgcgag
ctcaacgtggacgattgcaggcctaatccttgccagaacggcggcacgtgtcacgatctg
atcagtaacttcagttgttcctgtcctcctggtactttgggcttcatatgcgaactgaac
gtggacgactgtgccgtcggcacgtgccacaacaatggtacctgtaccgacaaagtaggc
ggattcgaatgcaaatgtcctccaggcttcgtgggacctagatgcgagggtgatatcaac
gagtgcttgtccaatccttgttcttcgccagggactcaagattgtgtgcaattagtcaac
aattatcactgcaactgcaaacctggctacatgggacgccactgcgaggtgaaagtgaac
ttctgcgacagctcgccgtgtcaaaatggaggcgtttgcaccgccaagcaagctggacac
acttgtctctgccctagtgactattacggaaacaattgcgaattcgccggctcctattgc
gacagagagccttgcttgaatggcggtacttgcagagtggccgaaacggacgttggatac
agatgttattgtccccctggaacgaccggaacacactgcgagatagacgccagagacgaa
tgcgccagtaatccgtgccaacaatccaatgccgtttgcaaaaatcttcttggagattac
gcctgcgattgcccgcccaagtggaccggtaagaactgcgaaatttacgatcctaattac
ggaggaggtatctttggcagtccgagctcgaacataccgaaaatcatgaacgcgtatgat
cttgacctggaattggagagaaaaaaatgtatcgagaacagatgcgaagagaagtctggt
aaccaccattgtgacgaggaatgtaacagatacgcttgcaacttcgacggaaatgactgt
tccttgggtattaatccgtggcgtaattgcactgctcctatcaactgttgggacgttttc
atgaacgacgtttgcgacgaggtttgcaacaacgcccagtgtttgttcgatggaagggac
tgcgaaaggaaattggcaccgtgcaatcctatctatgacgcttactgtcgcaaacactac
gccaacgggcactgcgattatggctgcaacaacgaagaatgtaattgggacggtctggat
tgtgacagggaaccgccatcattggcagaaggtgtgatttcagtagtggtaaggatggac
atgcagacattccgctccaacgtggtcgcatttctcagagacatcggtcacgaattaaga
accactttaagagtaaagcaagacgaactcggcaacgacatgatatatccctggaagaga
gaaagagaccccggtatgcgcaccaacttctttggtcgaccgaccaccatctacaccaac
acgcaaagtggtgtaatcgcctatttggagatcgacaacagaaaatgtaccgttactcaa
ggagcagtgtgtttcccatcagccaacgaagcggccgaatatctggcagccaccgcgtcc
aaacactccttatctcgcaacttcccgatcgaacaagtccggggggtcgtgggcccacag
ggtccagagtacccggacgctccaaccaactacaaatacgttttcatcggtatcgtgatc
gtggtacttggaggattattggtcggtgtgctggtcacggcgcaaaggaaacgagcggtg
ggtgtcacttggttcccagaaggttttttacgcaccaacagcggaagcggacagcgtcgt
agatcgagaagacgaggtccagatggtcaagaaatgagaaacttgaacaaacaaccgtcg
gtaaattgcatggatctcgatgtagggaatggacgagcgcaacaatggtcggacgacgag
tcagatttaccaccttcgaagaggatgagagcgatagaacctggatacgccagcgatcac
acagccattacggattacgaggaaacggagcctcgaatgtggactcagcagcatttggac
gccgcggagattcgtagaccggacgccggagttttgacaccgcctagtctcgaacatggt
caagacgtggacgccagaggaccctgtggaatgacaccattgatggtcgctgctgtacga
ggtggaggattagataccggggaagaggaggacgagagtgacggaacggcggccgtgatt
gccgatctagttgcacagggcgcagatttgaacgccaccacggataagagtggcgaaacg
tctcttcacctggcggcaaggtacgccagagctgacgcggccaagaggcttctcgatgct
ggcgcggatgccaactctcaggacaataccggtagaacgcctcttcattccgccgtcgct
gccgatgcgatgggagtcttccaaatactgttgaggaacagagcaacgaatctgaacgca
cgtatgcacgatggaaccacgccattgattctggccgcacgtctcgccaccgagggaatg
gtggaagatctcattaacgctgacgccgatatcaacgcagccgacaacagtggcaaaacg
gcgctccattgggctgcagctgttaacaacgtggacgctgtcaacatacttctggtccac
ggcgcgaatagggacgcgcaagacgacaaggacgaaacgccgttgttccttgccgccagg
gagggcagcttcgaagcgtgcaaagcgttgctcgatactttcgccaatagggagataacc
gatcacatggatcgattgccgagagacgtggccagcgagagattacatcatgatatcgtt
agattactggacgagcatgtacccaggtcgccacagatggtgaatgtgataccaaacggc
cctctcatgggctcgccaaatcatccacaattgataacgcatcccacagtgatcggctcc
gctccgaaacaagccaaatcgaagaagcggccgaaagctggtaccacggggaatccaaac
agtccggaatcggagggcggtgtagtggtggtaaggcgaaaaccatcggtgaagaagcca
ccggcaaaacgcggtgcccaacccccaaaccaggagattccccagggagctgagggagca
gagggaaatttaccgagtccttacgacagcgcaagtttgtacagcaacgcgcttccgtta
gtgagtcacacggccacggccaagcaaccaccaccgtacgaagactgcataaaaggccag
tccatgcagggccttcaacagttgggcctcgacacgttcacgaccaattacgggttacct
aattttcacgaccaactgttagcgtcgcaccaacgacaagcgcaaggaatggtgaacaca
ctgtcgccgccctatagcaatcagtcaccgccacactcggtgcaatcgaacatgacatta
tcgccacaggcgagctacatgggctcgccgtccccggcaaagagtaggccgtcattgcct
acttcaccaactcacatcgccgctatgagacaagcgacgcatcaaaagcacggtggcatg
ccaccggtgggattcgactttgagaatcttccctattcgtcgagtcaacaacagcagcaa
attcaacaaacacagcaacagatccagcaacagcaacagcagcagcaacagcagcaacaa
caacaacaacagagcacacaacagcagcagcagcaacagcaacagcaacagcagcagcag
cagcagcagcaacaacaaactcagcaatactaccagtacttgacgcccccttcccatcat
tccggaccagacgtaacaccgcagcatttaatgcaagcgcctgagagcttccccacccct
tcgccagatagtccaggtcactggtcttccagttcgccgcactccaacagtgactggtct
gaatgcatggcgtcaccaaacgcgtacggtgctggagccacccaccaaagtaacaagggc
tccgaggcgatctacatatga
DBGET
integrated database retrieval system
