Bombus affinis (rusty patched bumble bee): 126917108
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Entry
126917108 CDS
T09368
Name
(RefSeq) collagen alpha-1(III) chain-like isoform X1
Organism
baff
Bombus affinis (rusty patched bumble bee)
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NCBI-GeneID:
126917108
NCBI-ProteinID:
XP_050579531
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Position
6:complement(2242892..2249350)
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AA seq
1394 aa
AA seq
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MIGINQTIRFSMLALLIATVIVGSGAHEGSGGSSSLAYSSASASANAYANAGASAFSLSN
AFTGIGSLPTVDGSHDGHKGIRSYDNTGYNGNNQPNGGVKGNQRGGCPKCKWEDDDYWEK
DEDETEPEEKDEDDCDDGDDGQYREHGHYHGHKNKGGSPPGVQKLGVPNSNGQGPHTGVS
AASNAASSGSGTPFGTTPVKGGRPETGSSSSGSPWNKAFPVTGQQPGSGWNTGSGTTPKP
AWNQGFGGSPGTASHPSNSWNSGRVPNADVSSPTSDGSWNSGPKTGFGCSGNYQHGTGCA
QGSSGVGPVKQSPVPFSGSNPANVQKESPVHSTGPTAVYNPQGSPAGCSSSPYDASCADK
SVDPTRPHDSPFASSYGPNPRPGQYPVSGSPQSSPSGPPHGSPAEQGRYPGNGSPQSNPS
GSPYGSPAGQGQYPGSGSPQSSPSGSPHGSPAGQGQYPISGSPQSSPSSPAHGSPVGQGQ
YPGSGSPQSSPSGSPHGSPAGQGQYPGSGLPKSTPFGSPHGSPVGQGQYPGSGSPQSNPS
GSPHGSPAGQGQYPISGSPQSSPSSPARGSPVGQGQYPGSGSPQGSPSGSPHGSPAGQGQ
YPISGSLQSSPSSPARGSPVGQGQYPGSGSPQGSPSGSPHGSPAGQGQYPISGSLQSSPS
SPAHGSPVGQGQYPGSGSPQSSPSGTPQGSPAGQGQYPSSGLPKSNTGHGSDTRPYGGSP
WNSGNIARPGSLGNSVYPTSPQNSNANAVASSIAYAGTGAPTAGNGFDSSHPARGPSTSN
PVYSHGIPSNGSPSENAQTPGSSGSPNGNVPYGTQKPNYTGVKGGSSGTAPKHGTPKDGD
SKIFYVNVNPVPGSPAGVKPHASTGAPYSDTGKTPPSYQPAPYRGTGTPKPSYQPAPYGG
PGTTEPSYRPAPHDNTGTAKPSYQPAPYGGTGTAKPSYQPAPYGGTGAAKPSYQSTPYGG
TGTAKPSYQPVPYGGTGTTKPSYQPAPHDNTGTAKPSYQPASYGGPSTTKPSHELNSYPS
GETDKGCTSGSQGCGTGSGCSSGTSLNGSPDHKPCSPNDLSVGVNKASKPLGGFEANPND
FAQSPQQITPGTGSQGCTSGTSDGCTSGPSNPSYVYKTETTNKIPGEGVGSYPLNPFLTG
KIPSSGAGGPQLTATSKPVGYGNPFLQGTGAVAGAGAWSHAGTGVAASPGSGGKNVVSIG
GQAPKPIGKDNPFLSGLGHGRGDIGIDVTPNSIPGGSFAPDSNMGNSGLSQTNESPSFGD
KTQQGHSNHYPGSIWNSGSTNDGGSSAVRNPSTTNRGSGSGGGVGVGPGGFGNLFGSALS
GAFSSAQASSHANSGSGIAPDAGFGQANSGSWASSGASAGSQAGSSALASSGASAYASSS
ASSWAGAQPTFVKG
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgattgggataaatcaaacaatccggttctcaatgctcgcccttctaatcgccacggtc
attgttggttcaggagcgcacgaaggaagtggcggaagcagtagtctagcgtacagcagt
gcttcggcgtccgcaaacgcatacgcgaatgcaggtgctagcgcattctcgttgagtaac
gcatttactggaatcggaagtctacctacggttgacgggagccatgacgggcacaaagga
attcgcagttacgacaacactggctacaatggcaataatcagccaaacggcggagtcaaa
ggaaatcagcgtggtggctgtcctaagtgcaagtgggaagacgacgattactgggaaaaa
gacgaggatgaaactgaaccagaagaaaaagacgaagacgattgcgacgacggggacgat
ggacagtatagagaacacggtcattatcacggacacaaaaataaaggaggatcgcctccg
ggcgtacagaaattaggagtgcctaattctaacggtcaaggaccacacacgggagtcagc
gccgcgtcaaatgctgcgagtagtggaagtggcactccatttggaacaacgccagttaaa
ggaggacgccctgaaactgggagctcgagctcaggttcaccatggaacaaagcgttccct
gtaaccggtcaacaacctggatcaggatggaacacaggctctggaactacgccgaaaccc
gcctggaaccaagggttcggtggttcacctggaacagcttcgcatccttctaacagttgg
aattctggaagagtaccgaatgcggatgtatcgagtcctaccagcgatggaagctggaat
agtggtccaaaaacaggttttggatgctccggtaattatcaacacggcaccggctgtgct
caaggttcaagcggtgttggtcctgtaaaacaatctccagtgccattctctggcagcaac
cccgcaaatgttcagaaggaaagtcctgtacattccacgggtccaacagcagtatataat
cctcaaggatctccagcaggatgttccagcagtccttatgatgccagttgtgccgataaa
tctgttgatccaacgagaccacatgacagtccctttgcatcatcttatggaccaaatccg
agaccaggccagtatcctgtaagtggatcgcctcaaagcagtccttctggtcctccgcat
ggttctcccgctgaacaagggcgatatccgggaaatggatcgccccaaagcaatccgtcc
ggttctccatacggttctccggcgggacaaggtcaatatccgggaagtggatcgcctcaa
agcagtccttcgggttctccgcacggttctcccgcgggacaaggacaatatcctataagt
ggatcgcctcaaagcagtccttccagtcctgcgcatggttctcccgtaggacaaggtcaa
tatccgggaagtggatcgcctcaaagcagtccttcgggttctccgcacggttctcccgcg
ggacaagggcaatatcctggtagtggattgccgaaaagtactcctttcggttctccacac
ggttctcccgtaggacaaggccaatatccgggaagtggatcgcctcaaagcaatccttcg
ggttctccgcacggttctcccgcgggacaagggcaatatcctataagtggatcgcctcaa
agcagtccttccagtcctgcgcgcggttctcccgtaggacaaggccaatatccgggaagt
ggatcgcctcaaggcagtccttcgggttctccgcacggttctcccgcgggacaagggcaa
tatcctataagtggatcgcttcaaagcagtccttccagtcctgcgcgcggttctcccgta
ggacaaggccaatatccgggaagtggatcgcctcaaggcagtccttcgggttctccgcac
ggttctcccgcgggacaagggcaatatcctataagtggatcgcttcaaagcagtccttcc
agtcctgcgcacggttctcccgtaggacaaggtcaatatccgggaagtggatcgcctcaa
agcagtccttcgggtactccgcaaggttctcccgcgggacaagggcaatatcctagtagt
gggttgccgaaaagtaacactgggcacggttccgatacgcggccatacggaggatctcca
tggaactccggaaatatagccagaccgggaagcttaggaaattcagtatatccgacaagt
cctcaaaattctaatgcaaacgctgtagcttcaagtatagcgtacgcgggaactggtgcg
ccgaccgctggaaacggtttcgattctagccaccctgcacgcggtccatcgacatccaat
cccgtttattcacacggcattccttctaatgggtctccatctgaaaatgcacagacgcca
gggtcttcaggttctccaaacggaaacgttccttacggaactcaaaagccgaattacact
ggtgttaaaggaggttcttcgggtacagcacctaaacacggtactcccaaagacggagat
agcaagatcttttatgtgaacgtaaatcctgtaccaggaagccctgcaggggttaaacct
catgcatctacgggtgcaccttacagtgataccggaaaaacgccaccttcttaccaacct
gctccttatcggggtactggaacgccaaagccctcttatcagcctgctccttacggtggt
cctggaacgacagagccttcctatcgtcctgctcctcatgataatactggaacggcaaag
ccttcttaccaacccgctccttatgggggtaccggaacggcaaagccttcttaccaacct
gctccttatgggggtaccggagcggcaaagccttcttaccaatctaccccttatgggggt
accggaacggcaaagccttcttatcaacctgttccttatggggggaccggaacgacaaag
ccttcttatcagcctgctcctcatgataataccggaacggcaaagccttcttaccaacct
gcttcttatggtggccccagcacaacaaagccttcgcatgaacttaattcttatccatcg
ggtgaaacagataagggttgcacaagtggatctcaaggttgtggaactgggagcggatgt
agcagtggaacaagtctgaatggatctccagatcacaagccttgtagtccaaacgatctt
tcagtaggtgttaataaggcttcgaaaccattaggaggttttgaagcaaacccaaatgat
tttgcgcaaagtcctcaacaaatcacgcctggaactggttcgcaaggttgtacatctgga
actagcgacggctgtacctctggaccaagcaatccttcatacgtttacaagactgaaaca
acgaataaaattcctggagaaggagtagggtcgtatccgttgaaccctttcttaactgga
aagattcctagttctggtgctggtggtcctcagctaacagctactagtaagccagtcggt
tatggaaatcccttcctgcaaggaaccggtgcagtcgcgggagcgggagcatggagtcat
gcaggtacaggagtagcagcgagtccaggcagcggtggcaagaacgttgtttcgatcgga
ggacaggcacctaagcctattggcaaagataatcctttccttagtggattaggacacgga
aggggagacatcggaattgatgtcacgcctaattcaattcctggcggatcgtttgctcca
gacagtaacatgggtaatagcggattgagtcaaacgaatgaaagtccttcctttggcgat
aaaacacaacaaggacattccaatcattaccccggctcgatttggaattcaggttcaacg
aacgacggaggctcttcagccgtgagaaatccatccacaacaaaccgtggctcgggaagc
ggaggaggtgttggagtcggtccgggaggatttggaaatcttttcggtagtgctctttct
ggagcttttagcagtgcacaagcttcttcacacgccaattctggttctggaattgcacca
gatgcgggttttggacaagcaaacagtggaagttgggcttccagtggagcgtcggcagga
agtcaagctggaagcagtgccttggcttccagcggtgcttccgcttatgcgagtagcagt
gctagcagctgggcaggcgcacaacccactttcgtgaaaggttaa
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