Bombus affinis (rusty patched bumble bee): 126917458
Help
Entry
126917458 CDS
T09368
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03013
Nucleocytoplasmic transport
baff03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126917458
09122 Translation
03013 Nucleocytoplasmic transport
126917458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126917458
03041 Spliceosome [BR:
baff03041
]
126917458
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
126917458
Spliceosome [BR:
baff03041
]
Complex C
Other components
EJC/TREX
126917458
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126917458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
126917458
NCBI-ProteinID:
XP_050580299
LinkDB
All DBs
Position
6:complement(14040156..14043231)
Genome browser
AA seq
664 aa
AA seq
DB search
MAMFEVLRKEYSDYLQQCFKLSDIQIFQKKCVERCTNDSDRKAAIDQALRDTLLVILSEN
VSSNVPLLETYITFCIELCRKDLATASMPVMLLGDIFDSMTLDRCEQLFTFVENNVVVWK
EDLFFSACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNLE
NHTEFGSEKSEGDDLEQITKDDDKSDTKVPIDYNLYRKFWALQDFFRNPNQLYLKMHWKI
FSTHASSVLSAFSSFKLEEQRNYPSTCVKVESSMEGSHKETPYFAKYLTNQKLLELQLSD
SNFRRYVLLQFLILFQYLNSTVKFKAFLASGYETSETHELKPDQVEWVKGTTEQVYALLT
ETPPDGPTFAETVKNILKREEHWNAWKNEGCPPFKRPTPDSSADIEESKKPKRPRRKIGD
VIRDAQAVGKYHMGNPELTKLWNLCPNNLEACKSKERDFLPSLETYFEEAIMQLDPNAMV
EDEYKKVNDGNFGWRALRLLARRSPHFFVHGNYPINKLPEYLETMIKKIAKDRPQTQSDI
KLETEETPPPEANDQEFNEDVLKQESEQVEAENTDTKGRKLTKVTPDMVAKLSEILKNDW
KKLATKFGYTSEEITFFQGKPTPYEQCKNMLEIWAEEDVDASMENLAYILEGLKFTEALA
VLKS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggccatgttcgaagttttaagaaaagaatatagtgattatttgcaacaatgttttaag
ctgtcagatatacaaatatttcaaaagaaatgtgtcgaacgatgtacaaatgatagtgat
agaaaagctgcaattgatcaagcattaagggatactcttcttgtaatattatctgaaaac
gtatcaagtaatgtgcctctacttgagacctatattacattctgcattgaattatgcaga
aaagacttagcaactgcaagtatgccagtgatgctacttggtgatatatttgattctatg
acactcgacagatgcgaacagttgtttacttttgttgagaacaatgtggttgtgtggaag
gaagatttattctttagtgcttgtaaaaacaatttgttaaggatgtgcaatgacttactt
agaaggttatcgagatcacaacaaactgtattttgtggaagaattcttttatttctggct
aagttttttcctttttctgagaggtctggtcttaatattgttagtgaatttaatttggag
aaccatacagaatttggctctgaaaaatcagagggagacgatttggaacaaataactaag
gatgatgataaatcagacactaaagtaccaattgattataatttatatagaaaattttgg
gcactccaagattttttcagaaatcccaatcagttatacctaaaaatgcactggaagata
ttttcaacacatgcttcaagtgtactgtcagcattttcatcttttaaattggaagaacaa
cgtaattatccttcaacatgtgttaaagttgaatcttccatggagggatctcataaggaa
accccttacttcgcaaaatatttaacaaatcaaaaattgttggagctacaattatctgat
tcaaatttcagacgatatgtattgctgcaatttctcattcttttccaatatcttaatagc
actgttaaatttaaagccttccttgccagtggctatgagacaagtgaaacacatgaacta
aaacctgaccaagtagaatgggtaaaaggaaccacagagcaagtatatgccttactgaca
gaaacacctcccgatggtccaacatttgcagaaactgttaaaaatatattgaaacgcgaa
gagcactggaatgcttggaaaaatgaaggatgcccaccatttaaaagaccaactccagat
tctagtgccgacatagaggaatcaaaaaagccaaagagaccaaggcgtaaaattggagat
gtcattagagacgctcaagcagtaggaaaatatcatatgggaaacccagaactcacgaaa
ttatggaacttatgtcccaataatcttgaagcatgtaaatctaaagaaagagacttcctt
ccatctttagagacatattttgaagaagctatcatgcaattagatcctaatgcaatggta
gaagatgaatacaaaaaagtaaatgatgggaattttggctggcgagcattgagattatta
gctagacgtagtcctcatttttttgtccatgggaattatcctattaataaattacctgaa
tatctcgaaacaatgattaaaaaaatcgctaaagatcggccacagacacagtcggatata
aaattagaaacagaggagactccacctccagaagcgaacgatcaagaatttaacgaagat
gttctcaagcaagagagtgaacaagttgaagccgaaaatacggatacgaaaggacgaaaa
ttaacgaaagtgacgcctgacatggtggcgaaattatcagaaattctgaaaaacgattgg
aaaaagttagcaaccaagtttggctacacgagtgaagagattacattttttcaagggaaa
ccaacgccgtatgagcaatgtaaaaatatgttggaaatttgggcggaagaagatgtagat
gcttcgatggaaaatttagcatatattttagaaggtttaaaattcacggaagcgctagct
gttttaaaatcctaa
DBGET
integrated database retrieval system
