Bombus affinis (rusty patched bumble bee): 126919016
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Entry
126919016 CDS
T09368
Name
(RefSeq) RING-box protein 1A isoform X1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03420
Nucleotide excision repair
baff04120
Ubiquitin mediated proteolysis
baff04141
Protein processing in endoplasmic reticulum
baff04310
Wnt signaling pathway
baff04341
Hedgehog signaling pathway - fly
baff04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126919016
04120 Ubiquitin mediated proteolysis
126919016
09124 Replication and repair
03420 Nucleotide excision repair
126919016
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
126919016
04341 Hedgehog signaling pathway - fly
126919016
04350 TGF-beta signaling pathway
126919016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
baff04121
]
126919016
03400 DNA repair and recombination proteins [BR:
baff03400
]
126919016
Enzymes [BR:
baff01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
126919016
Ubiquitin system [BR:
baff04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
126919016
Multi subunit Ring-finger type E3
SCF complex
Ring finger protein
126919016
Cul2 complex
126919016
Cul3 complex
126919016
Cul4 complex
126919016
Cul7 complex
126919016
Cul8 complex
126919016
Cul9 complex
126919016
DNA repair and recombination proteins [BR:
baff03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
126919016
TCR (transcription coupled repair) factors
Cul4-CSA complex
126919016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
126919016
NCBI-ProteinID:
XP_050583658
LinkDB
All DBs
Position
7:complement(10501349..10502678)
Genome browser
AA seq
113 aa
AA seq
DB search
MASAMEIDDEESDLPTSSSSKGEKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIE
CQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcaatggaaattgatgatgaagaaagtgatttaccaacttcgagtagtagt
aaaggagagaaaaaacgtttcgaagtaaaaaagtggaatgctgtggctctttgggcatgg
gatatcgtagtagataattgcgcgatctgccgtaatcatataatggatttatgcattgaa
tgtcaagcaaatcaagcgtcagctactagcgaagaatgtaccgtagcttggggtgtatgc
aatcatgcattccatttccattgcatctcacgttggttgaagactcgacaagtttgtcca
cttgataatcgagagtgggagttccaaaaatacggtcattag
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