Bombus affinis (rusty patched bumble bee): 126920945
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Entry
126920945 CDS
T09368
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126920945
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
126920945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
126920945
NCBI-ProteinID:
XP_050587930
LinkDB
All DBs
Position
10:12206564..12212157
Genome browser
AA seq
1214 aa
AA seq
DB search
MDDSPVIKRPKPSDSEEELFRMQEEFLRNKQQPSAKVINLRRSETFLNTSSAVATDSQTN
SNKIRSKFSESKRLRNRDGVSTSQSSGDVINPAIKEEAGKNLNPGLKNIAHNMQIASSSI
ILGNIIEKKYNTCKYKFDKKEFLCSSNGFPEAFVPKHMKNDKNKSLFLHEISPKSIVRNK
VEKSETIEPLYNTDSSVIVEGSWANEIHKENLERLSQMSQEDILKEKSKLEMTLKPELIQ
FLKNRRNKKQKVNKAPEDNKTSNGKAQDQNEKSVNAEKLVAEEVPNKDHENLVQNNDVVP
MQIDELQQDIPKPSKELMQQAKEKGWVHMDSLEPEKLKWMENIPEKKDEPIPDEPYNARF
DFNGVLLAYKDDNVPIEKGLHHHGEEPERPGYSLQELLQLSRSSAQQQRCTALTTLANII
EKSRKGWYDKALQPAPLTALSQKNLLLLLRFSLDETSVAVITATLQALRAFLYSEADEVC
LDRLYGFRNYKEPVLATPKTDVDDISNLKDHELVQLDAIAALLRTDILLRISYILNEIRP
PPVAVTCALEILIRLVRHSPITVLKMINSPNLLETIIEHFMPLSTDALAMTDNINNVYGV
PVVAAVRFCRILLCYGGKSVAQKLNNLKIMQRIISYASCDAGKGSYNFIIENLRLWRTLL
LHEEAMDSLTGAQLFLVSQLQLLLSNHDIQSASELSCEYAAALIAVASCLTSLKANISVL
LFKWSTQLLSLSNFTWGNTKLIAETLLAVSDSTAIKTLNISRSQVFSKLNSTSNLLSDCS
LALEREPSALPHLGVLTYEGQVQHIVSHQSCMPFLATVLNVFIDHSFIEEIQAVLSLPQV
YRYLKRLETTNWCLERSWYTRSELSFLVAIVNASSFVKDKLDNKTMYIIWKIAIKLVSSL
PADCPSDVKKMLRVSLAKEKLNLEIVTSELEKLNLNSNIGDIKLNLSHDISGLYERYIEL
DGKWDQAAMPKDWLYLPIVHIYTKCRNNNACNDDDKAVILAVLSLELVLPDLVEKLSQSL
RFSRLVLIYLCETLYLSNDVSALLTRAVTTLLKDNYKKLNFTIDLPGLNSFTDLFTAMCE
HFCSTSYGDYGFSMTLLVPIAQRHDVHYRKLLWSEHVGLLRYVRLPLEQLVIPLKEYLYP
LEEDTSLIESYITALVRGIVKESWCPIPYTIALHHSAMYLKQSNKLAVRMRTQLEKIPDK
VLATLLLNYQSPTF
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagtccagttataaagcgacctaaaccaagtgatagcgaagaagaattgttt
cgtatgcaagaagaatttttaagaaataaacaacaaccatcagccaaagtgatcaattta
agaagatctgaaacatttttaaatactagttctgctgtagctactgacagtcaaacaaat
tctaacaaaataagatcaaaattttctgaatcaaaaagattaagaaatcgtgatggggtg
tctacttctcaaagtagcggtgatgttataaatcctgcgattaaagaagaagctgggaaa
aatctaaaccctggattgaagaatattgctcataatatgcaaatagcatcttcatcgata
atattaggaaacatcattgaaaagaaatacaatacatgcaagtataaatttgataaaaag
gaatttctttgttccagtaatggttttcctgaagccttcgttcctaaacacatgaaaaat
gataagaataaaagtttatttttgcatgaaatttctcctaaaagcattgttagaaataaa
gtagaaaaatctgaaacgattgaacctttatataatacagatagtagtgttattgtagaa
ggatcatgggcaaatgaaatacataaagaaaatttggaacgattaagccaaatgtcccaa
gaggatattcttaaagaaaaaagtaaacttgagatgactttaaagccagaattgatacaa
tttttaaaaaatagaaggaataaaaaacaaaaagtaaataaggctccagaagacaataaa
acatcaaatggcaaagctcaagatcaaaatgaaaaatctgtaaatgcagaaaagttagtt
gcagaagaagttcctaacaaagatcatgaaaatttagtccagaataatgatgttgtacca
atgcagatagatgaattacaacaagatatacccaaaccttcaaaagaattgatgcaacaa
gctaaagagaagggttgggtgcatatggattctcttgagcctgaaaaattaaaatggatg
gaaaatatacctgagaaaaaagatgaacctattccagacgaaccgtacaatgctcgtttt
gactttaatggtgtattattagcgtacaaagacgacaatgtacctattgaaaaaggtctc
catcatcatggagaagaacccgaacgtcctggttattcattacaagaattattgcaactg
agtcgctcatcggcacaacagcaacgctgtacagctcttacaacgttagcaaatattata
gaaaaaagtcgcaagggctggtatgataaagcattacaacctgcaccattgactgcatta
agtcaaaaaaatcttctgttactattaagattttctttggatgaaacctcagtagctgtg
atcacagcaactttacaagcactaagagcttttttatatagcgaagcggatgaagtctgt
ttggacagactatatggtttccgaaattataaagaacctgttttagcaacaccaaaaact
gatgtcgatgatataagcaatttaaaagatcatgaattggtacaactagacgcaattgct
gccttattaagaactgatatactattaagaattagctacattttgaatgaaatacgacca
ccacctgttgctgtaacttgtgcattagaaattctaattagacttgtaagacattcgccc
attactgtcttaaaaatgataaattctccaaatcttttggaaacaataattgaacatttt
atgcctttgtctacagatgcattggcaatgacagataatataaataatgtgtatggtgta
ccagtagtggctgcagttagattctgtcgtatcttactttgttatggaggaaaatctgtt
gcccaaaaattaaataatcttaaaattatgcaacgcattatatcatatgccagttgtgat
gcagggaagggaagctataattttatcatcgaaaatttacgtttgtggagaacattgtta
ttgcatgaagaagccatggatagtttaactggagcacaattatttcttgtgtcacagtta
cagcttctgttgagtaatcacgatattcaaagcgcatctgaattatcttgtgaatatgca
gcagccttaattgccgttgcaagttgcttgacgtcgctaaaagcaaatatatcggtctta
ctgttcaaatggagtacacagctactatccttaagtaatttcacgtggggaaatacgaaa
cttatcgcagaaacgttattagcagttagtgatagtactgcgattaaaacattgaacata
tctcgatcgcaagtattttctaaacttaattctacttcaaatttgttaagtgattgttct
ttagctcttgagcgtgagccttccgctttgcctcatctgggagtattaacctatgaagga
caagtgcaacatattgtgtctcaccaatcttgtatgccctttcttgcaacagttttaaat
gtattcattgatcattctttcatagaagaaattcaggcagtacttagtcttccacaagtc
tataggtatttgaaaagattagaaacaacaaattggtgtttagagagatcatggtataca
agatctgaattgtcttttttagttgctatagtaaatgcatcctcttttgttaaggataaa
ttagataataaaacaatgtacattatttggaaaattgctattaaactcgtatcatcttta
cctgccgattgtccatccgatgtaaagaagatgcttagagtttcactagcaaaggaaaaa
ttaaatttagagatagtaacgagtgaattagagaaattaaatctgaattcaaatattgga
gatattaaattgaatttaagtcatgatatatctggtttatacgaacggtatatagaatta
gacggtaaatgggatcaagcggcaatgcctaaagattggctttatttacctattgtacat
atttatacaaaatgtagaaataataatgcatgtaacgatgatgataaagctgtcatctta
gccgtgttgagtttagaattagtactaccagatttggttgaaaaattgtcacaaagtttg
agatttagtagattggtacttatatacttgtgcgagacgctgtatttaagtaacgatgtt
tctgctttacttactagagccgtgacaactttattaaaagataattacaagaagcttaat
tttacaatagatttgccaggacttaattcttttaccgatttgtttactgcgatgtgtgaa
catttttgttcaacttcctatggtgattatggtttttcaatgaccttattggtaccaatt
gcacaaaggcacgatgttcattatagaaaattgttatggtcggaacatgtaggtttgctt
cgatatgttagattaccattagaacagttagttattccgttaaaagaatatctttatcct
cttgaggaagatacatctttaatagaaagttatataacagcgcttgttaggggaattgtt
aaagaaagctggtgtcctattccttatacaattgcattacatcattctgctatgtacttg
aaacaatcaaacaaattagcagtacgaatgagaacccaattagaaaaaatacctgataaa
gttttggctactcttttgttaaattatcaatcgcctacattttaa
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