Bombus affinis (rusty patched bumble bee): 126923175
Help
Entry
126923175 CDS
T09368
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126923175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
baff03041
]
126923175
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126923175
Spliceosome [BR:
baff03041
]
Complex A
U2 snRNP components
U2 related factors
126923175
Complex B
126923175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
126923175
NCBI-ProteinID:
XP_050592335
LinkDB
All DBs
Position
13:complement(11931001..11935424)
Genome browser
AA seq
1030 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRSATPEKKRRRSRSRDRDRERDKGRHRERRSRSRDRDRD
RRDRSERDRDRDRKRGDSKEKRLTGSKSSRSGKDRSNRSRSRERKEKEKGDSDELPFDHT
KLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKASILANLQLPMKKWSLED
DSDEETPVVQNSNKECKEDGETKEQAEQVKEEAKCDEEEVDPLDAFMAEVQEEVRKVNKL
DSKGGKNANNGTGTAGTQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLH
ETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTSEEVEAYKEELEGIRVKG
KGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTL
AFLLPMFRHILDQPPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTG
ISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVM
RIMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSIVCKDVEQHVVVLEEDQ
KFYKLLEILGHYQDKGSAIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILD
FKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFIT
SEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVHTGGGFSGKGFKFDESE
AALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPSATNIAVPGQP
VASATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAA
KLNTKLNYQPREEDLVESDAEAGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYS
EAGLTVRGTYIAPGKAPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQASGAH
TASRGRYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaagtagcgacaaggacaggcatcacagaaggcgatctagatcgcgatccaga
tcgcgatccgccacaccggagaagaaacgacggcggtctaggagtcgtgatagggataga
gaacgagataaaggtcggcacagggaaagaaggagccgttccagagatcgtgacagagat
agaagagatcgctccgaaagagacagagatcgagacaggaaacgcggcgacagtaaagaa
aagcgtcttacaggctcaaagtcttcgcgttcgggcaaagatcggtcgaatagatcgaga
tcgagagagagaaaggagaaagagaaaggcgacagcgatgaattgccgttcgatcatacc
aagttggacaaggaggaagagcagaaaagattggaattggaaatgcaaaagaggagagaa
agaatagagaggtggcgcgccgaaaggaaaaagaaagagttggaggcaacgaagaaagac
ggtaaggcatccattttagcaaacctacagttgcctatgaaaaagtggtccctcgaggat
gacagtgatgaagaaacgcctgttgtccaaaatagcaacaaggaatgcaaagaagacgga
gaaacgaaagagcaagcggaacaagttaaggaagaagctaaatgcgacgaggaggaggtc
gatccccttgatgcctttatggcagaagttcaagaggaagttcgtaaggtgaacaaactc
gatagcaaaggtggaaagaacgcgaataacggcacagggacggcgggtactcagagcggt
ggcgttgttatcgtcaccggtgtagcgaaaaagaaagtgcagaagcaaaagggcgaattg
atcgaacagaatcaagatggtcttgaatattccagcgaagaggaaggcgaaaatcttcac
gaaacagccgctggcatcgcgaacaaacagaagcgagaattagccaaagtcgatcatgca
acgaccgagtatcaaccgttcagaaaatcattttacgtcgaagtacctgagatcgcgaga
atgacgtcggaagaagtggaagcgtataaagaggagttagaaggtattcgcgtgaaaggc
aaaggttgcccgaagcccattaaatcgtgggcacagtgtggcgtcacgaagaaagagttg
gaggtgttgaagaaactcggttacgagaaaccaacccctattcaatgtcaagccatcccg
gcgatcatgtctggccgtgatctgataggcatagcaaagacgggcagtgggaaaacgttg
gccttcttgctaccaatgttcaggcatattctcgatcagccaccattggcagacggcgat
ggtccgatcgcgttgatcatgacaccaactagagagctatgcatgcaaatcggtagagat
tcgaaaaagttcacaaagtctctggggctgtcgcatgtctgcgtttacggtgggaccggt
atatcggaacagatagccgagctaaagagaggcgccgagataatcgtttgtacgccaggt
agaatgatcgatatgctagccgccaacagcggaagggtaacaaacctgcgcagagtaacg
tacgtggttcttgacgaagcggatagaatgtttgacatgggtttcgagccccaggttatg
cgtattatggaaaacgttcggccagatcggcagaccgtactgttcagcgcgacgttccct
cggcaaatggaagcattggcaagaagaattctaaccagacctgtagaagttcaggtcgga
ggacgatcgatcgtttgtaaggacgtcgaacagcacgtcgtagttctcgaagaggatcaa
aagttttacaagttacttgaaatcctcggtcactatcaagataaaggttccgctataata
ttcgtcgacaagcaggagaacgcagacaccttactcaaggatctcatgaaagcctcttat
tcctgtatgtcgcttcacggaggtatcgaccaatgcgacagagactcgactatattggac
ttcaaggctggcaggacaaaattgttagtcgcaacgtcagtggcggccagaggtctggac
gtgaagcatctggtgcttgtggtgaattacgactgcccgaatcactacgaggattacgtg
cacagatgcggaagaacgggaagagccggcaacaaggggtacgcgtacacttttatcaca
tcggagcaggaacgttacgcgggtgatattttacgtgctcacgaattagcgggtgtcccc
gttccggaaccgttgcgtcaactgtgggagggatacaaagctcgacaagcggcagacggc
aagaaggttcacacgggcggtggtttcagtggtaaaggattcaagtttgacgaatcggag
gcagcgttggcgaacgaaaagaaaaagttccaaaaggcagctctgggattgcaagattcc
gacgacgaggatatagagaacgacatcgatcaacaaatcgagagcatgcttgctccaaag
aggacggttcgtgaaatcgccagaccttccgccaccaatatcgcggttcctggtcagcct
gtagctagcgcgactgacaagttggagttggccaggcgactggcgtccaagatcaacatt
gcgaagaatctaggtgcggaggcgaagggtgcaacgcagcaagcagccgaagctatactt
aaaggtgctggtcccaccaatcttattacagcgaaaacggttgccgaacagctggctgcc
aagttgaacacgaaattgaattaccaaccacgcgaggaggatctagtggaaagcgacgca
gaggctggtgaacaaacgttccgcaaatacgaggaagaattggagatcaacgattttccg
caacaggctaggtggcgagttacaagcaaggaagctctcgctcagatctcggagtactcc
gaggcaggtctcacggttagagggacttacatcgcacccggtaaagcaccaccggaagga
gagaggaagttgtatctcgccatcgaatctaccagcgagctggcagtcagcaaggccaaa
gcggaagtttcgcgtttgatcaaggaagaactgatcaagttacaggcgtccggagcgcat
accgcatctcgcggtcggtacaaggttctgtaa
DBGET
integrated database retrieval system
