Bombus affinis (rusty patched bumble bee): 126928926
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Entry
126928926 CDS
T09368
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
baff01002
]
126928926
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
baff04121
]
126928926
Enzymes [BR:
baff01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126928926
Peptidases and inhibitors [BR:
baff01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
126928926
Ubiquitin system [BR:
baff04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
126928926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP47_C
UCH_1
Motif
Other DBs
NCBI-GeneID:
126928926
NCBI-ProteinID:
XP_050600791
LinkDB
All DBs
Position
1:complement(13336722..13346626)
Genome browser
AA seq
1277 aa
AA seq
DB search
MVCRAGQICFIQCNLPGVKNKIFTTDRLLLHESTRGEDLYVYIGEQCQIQPDSFKLYLVS
GGKLIDLSDKKDKTMSEIGVDFSFDRESSTEHKHTLVVMDPADILMQKQFRQQTAYNAYN
PPPPSPNHSSVWGEDNNVDFKSLIKSETSYVGLVNQAMTCYLNSLLQALYMTPEFRNALY
NWEYVEGSEKDEANSIPYQLQKLFLNLQTSTKSAVETTALTKSFGWDSTEAWQQHDIQEL
CRVMFDALEQKFKNTEQADLINRLYEGKMIDYVKCLECGTEKFREDTFLDIPLPVRPFGS
NVAYTSVEEALRAFVQHEILEGSNQYHCEKCNKKCDAHKGLKFTKFPYLLTLHLKRFDFD
FKTFHRIKLNDKVTFPDTLNLNSFIASMPNQESPSTDENISLAKCDDNSITDSGTLDDDC
PPCENSLPNSNHSTNHDQDDDEGIDMSNGPSTSNCAVHNHENEKNRSSNAAKGPYNYELF
SIMIHSGSASGGHYYAYIKDFRTNEWFCFNDQSVTQITHDDIQKTYGGGSTRSYFTGAYS
STNAYMLMYRQIDSARNALPIQVQDFPKHIQELLKKMKENEDNDRESREKDLATPKVKVY
CQHPTEDKKLNFRLSFSPNVTWAQTTMIVYKNFCLEGMVSLNQCRLVVYDHNNELIVASY
EGREHETFASIWGNRVNRYSLLLEIRDKDQKFEPHLRGGIVTKVYVVDVSRKKLIEGPLN
VRGLFTQTVREYKQVVGKFINMDPGDMKIVLRKHGTDAILVQNDDAILAVADFCNLIKVF
VCTNADAECNKSYFETTICGIAEQLENIITLRIKLPPNSSKEILEELNIPMLDEVNKDKE
KPVTDSPSKVNIIEPHRDASTKCNETSKSGKLVEDTSVRNASPQLVEGEEWHTPEQSNSE
DSSLSDSDKTLVGDAPGDEDFQLPYLPSSTSNRAIKMLNQVGLENWDNIIDDSEYYFKAT
PYTNHNEKFLKVLVDKRMIFNTLKKNLEPYVGVPAEYFKICRYFDECGESECSCLLSQLV
SYEDGEKLWIEIGRALRNGEFTVKLHQFFLDSAKSKFLFEWIVSEDMTVGEAKKEILAEM
KRRYNIEIPYERCRLREKCFVLPSKVLLDHQKFKDFQYYSQFEMIVQELPDKDPVTNNNQ
VIVFVRRWYPIKFHIGPPQEIVLDETTLKEMMKKLSLISDIPEEYINIIRGKGSVHMPIV
RIENEEDWIGLTTLVEFNVEDGAVFLYRDSRETSHPLTQEEYDEIAIREVSPSLPLSSAS
RCNARKEKALRIYLDGE
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggtttgtagagctggtcaaatatgtttcattcagtgcaatctacccggagttaaaaat
aaaatctttactactgacagacttctgcttcatgaatctacccgtggtgaggatctttat
gtttatattggagagcagtgtcaaatacaaccagacagttttaagttgtatttagtatca
ggtggaaaattgatcgatttatcagacaagaaagataaaacaatgtcagaaattggtgtg
gatttttcttttgatcgagaatcatcaactgagcataagcacacacttgtagttatggat
ccagcagatattttgatgcagaagcaatttcgtcaacagactgcatataatgcatacaat
cctccaccaccatctcctaatcattcgtcagtgtggggtgaagataataatgttgatttt
aaaagtcttattaagtctgaaacaagctatgtcggtttagtcaatcaagcaatgacatgt
tacttaaatagtctattacaagcgttatatatgactcctgagtttcggaatgcattgtat
aattgggaatatgtagaaggatcagaaaaagatgaagctaatagtattccatatcaacta
cagaaattatttttaaatttacagacatcaacgaaatcagcagtggaaactacagcacta
acaaaaagttttggttgggattctacagaagcttggcaacaacatgatattcaagaacta
tgtagagttatgtttgatgctttagaacaaaaatttaaaaatacggaacaagctgattta
ataaacagactttatgaaggaaagatgattgattatgttaaatgtcttgagtgtggtact
gagaaatttagagaagacacttttcttgatataccattaccagtaagaccttttggtagt
aatgtggcatacacaagtgtggaagaagctttaagagcatttgttcagcatgaaattttg
gaaggaagcaatcagtatcattgcgaaaaatgtaataaaaaatgtgatgctcataaagga
ttaaaatttacaaaatttccctaccttctgacacttcatcttaaacgatttgattttgat
ttcaaaacctttcatagaataaaacttaatgataaggttacttttccagatacattaaat
ttaaattcttttattgcttctatgccaaatcaagaatctccgagtactgatgaaaatatt
agtttagcgaaatgcgacgataactctataacagatagcggcacattagacgatgattgt
cctccctgtgaaaacagtcttcctaatagtaatcattcaacaaatcatgaccaagatgat
gatgaaggtatagatatgagtaatggaccttcaacgtcgaattgtgctgtgcataatcat
gaaaacgaaaaaaatcgtagcagtaatgcagcaaaaggaccttacaattatgaattgttc
tcaattatgattcatagcggtagtgctagtggtggtcattattatgcttatataaaagat
tttagaacaaacgaatggttttgtttcaatgatcaaagcgtaacacagataactcatgac
gacattcagaaaacgtatggtggtggttcaaccaggtcatattttactggagcttatagt
agtactaatgcatacatgctcatgtatagacaaattgattctgctcgcaatgctttgccc
atacaagtgcaagattttccaaaacatatacaggaattgttgaaaaagatgaaagaaaat
gaagataacgacagggagagtcgtgaaaaagatcttgcaacacctaaggtgaaagtatat
tgtcaacatcctacagaagataagaaactaaattttagactttccttttcgcctaatgtt
acatgggctcaaacgacaatgattgtttataagaatttttgcttggaaggaatggtgagc
ttaaatcaatgtcgtttagttgtttacgatcacaataatgagttaatcgtggctagttac
gaaggtagagaacatgaaacgtttgcaagtatttggggtaatcgagtgaatcggtatagt
ttattattagaaatacgtgataaagatcaaaaattcgagccacacctacgaggtggtatt
gtaactaaagtgtacgtcgtcgacgtatctagaaagaagcttattgaaggaccattaaat
gtacgaggtttatttacacaaacagtgagagaatataagcaggtggtaggaaaatttatt
aatatggatccgggcgacatgaaaatagttttacgaaaacacggaacagatgcaatactc
gtacagaatgacgacgctatattagcagttgcagacttttgtaatttaattaaagtcttt
gtatgtacgaatgccgatgccgagtgtaataaatcttactttgaaacaacaatatgtggt
attgctgaacagttagaaaacattataacactacgtatcaagttacctcctaattcaagc
aaagaaatattggaagaattaaatattccaatgttagatgaagtgaataaagacaaagaa
aaacctgtgactgatagtccatccaaagtaaacattattgaaccgcatcgagatgctagt
acaaaatgcaacgaaacttcaaaaagtggaaagcttgttgaagatacttcagtaagaaat
gcaagcccacaattggtagagggtgaggaatggcatactcctgaacaaagtaatagcgaa
gatagtagtctcagtgatagtgataaaactttagttggagatgctccaggagacgaagac
tttcaattaccttatcttccatcgagtacaagtaatcgcgccattaaaatgttaaaccaa
gttggactcgaaaactgggataatatcatcgatgattcagaatattatttcaaagccacc
ccatatacaaatcataatgagaaatttttgaaagtattagtggataaaagaatgatattc
aatactttgaagaaaaacttagagccatacgttggtgtacctgcagaatattttaaaatt
tgtcgttattttgatgaatgtggtgaatcagaatgtagctgtttacttagtcaacttgtt
tcttatgaagatggagagaaactttggatagaaataggacgggctttacgtaatggtgaa
tttacagtaaaattacatcagtttttccttgattcggctaagagcaaatttttgttcgaa
tggatagtctcggaagacatgactgttggggaggcgaaaaaagagattcttgcagaaatg
aaaagaagatataatatagaaataccatatgaaagatgtcgattaagggaaaagtgtttt
gtgttaccttcaaaagtacttttagatcatcaaaagtttaaagatttccaatattattct
caatttgaaatgatcgtacaagagttacctgataaagatccagttaccaataacaatcaa
gtcattgtttttgtccgacgttggtatcctatcaaatttcacattggtccaccacaagaa
atcgtattggatgaaacgaccttgaaagaaatgatgaaaaaattatctttaatatcggat
atacctgaagaatatataaatataataagagggaaaggttcagtacatatgcctattgta
cgaattgagaatgaggaagactggattggattaacaactcttgttgaatttaatgttgaa
gatggtgctgtgttcttatatagagatagcagggaaacttcacatccattaacccaagaa
gagtacgatgaaatcgcaattcgagaagtatcaccttctttaccactttcttccgcgtca
cgttgtaatgcgcgtaaagagaaagcgcttagaatatatttggatggtgaatga
DBGET
integrated database retrieval system
