Buttiauxella agrestis: BADSM9389_28720
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Entry
BADSM9389_28720 CDS
T06676
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bage
Buttiauxella agrestis
Pathway
bage03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bage00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BADSM9389_28720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bage03400
]
BADSM9389_28720
DNA repair and recombination proteins [BR:
bage03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BADSM9389_28720
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BADSM9389_28720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
SBDS_domain_II
AAA_22
DUF87
IF2_N
Motif
Other DBs
NCBI-ProteinID:
BCG10197
LinkDB
All DBs
Position
complement(3093924..3095939)
Genome browser
AA seq
671 aa
AA seq
DB search
MSKAFKLNSAFKPSGDQPDAIRRLKEGLEDGLAHQTLLGVTGSGKTFTVANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDSSVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSIIRRLTELQ
YTRNDQAFQRGTFRVRGEVVDIFPAESDDLALRVELFDEEVERLSLFDPLTGQVDQAIQR
FTVYPKSHYVTPRERILQAMEEIKVELADRRKVLLANNKLLEEQRLTQRTQFDLEMMNEL
GYCSGVENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYKGDRSRKET
LVEYGFRLPSALDNRPLRFEEFEALAPQTIYVSATPSNYELEKSGGDVVDQVVRPTGLLD
PIIEVRPVGTQVDDLLSEIRKRVEINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMAKAIGETERRREKQQRYNEENGITPQGLNKKVVDVLQLG
EGMAKTKGRMKSKARSVIEDDEIILTPKALQQKIHQLEGKMLEHAQNLEFEEAAQIRDQL
HQLRQLFIATS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcgttcaaattaaattcagcattcaaaccttctggcgatcagcctgatgcc
attcgtcgcctgaaagagggtctggaagacggacttgcgcaccagactttattaggtgta
accgggtccggtaaaacattcaccgtggcaaatgtgattgctgatttacaacgccccact
atggtgctggctccaaacaaaacgctggcggcgcagttgtatggcgagatgaaagagttc
ttcccggataacgcggtggagttcttcgtttcttattacgactactaccaacccgaagcc
tatgttccaagctctgatacatttatcgaaaaagattcctcagtgaacgagcacatcgag
caaatgcgcctgtcagcaaccaaggctttgctcgagcggcgtgatgtcattgttgtggcg
tcggtgtcggcgatttacggtctgggcgacccggatttatatctgaagatgatgcttcac
ctgaccaaagggatgatcatcgatcagcgttctatcatacggcgcctgacggagctgcaa
tatacccgcaacgaccaggcattccagcgcggtactttccgcgtgcgcggtgaagtggtt
gatatcttcccggccgagtcggacgacctcgcattacgcgttgagcttttcgatgaagaa
gttgaacggctttcgctgtttgacccgctcacaggtcaagttgaccaggctatccagcgt
ttcactgtctaccctaaatcgcactacgtcacaccgcgcgaacgtattctgcaagcgatg
gaagagatcaaagttgaactggctgaccgcagaaaagtgctgctcgccaacaacaaattg
cttgaagagcagcgcctcacgcagcgaactcagtttgatttagaaatgatgaacgaattg
ggctattgctctggcgttgaaaactactcgcgcttcctttctggccgtgggcctggcgag
ccgccgccgacgctattcgattatctgccagccgacggcttgctggtggttgacgaatcc
cacgtcactattccgcaaatcggtggaatgtacaaaggtgaccgttcgcgtaaagaaacg
ctggtggaatatggcttccgtctgccttcagcgcttgataaccgccctttgaggtttgaa
gagtttgaagcactcgcgccgcagactatttatgtttcggcaacaccgagcaattacgaa
ttagaaaaatcgggtggcgatgttgtcgatcaggtcgtcaggccgaccggcttgctggat
ccgatcatcgaagttcgcccggtggggacgcaggtcgacgatctgctttctgaaatccgt
aaacgtgtcgaaattaacgagcgcgttttggtgacgacgttaaccaaacgtatggccgaa
gatttgacggagtatctcgaagagcatggcgagagagtgcgctatctgcactcggacatt
gataccgtcgagcgtatggaaatcattcgtgatttgcgccttggcgagtttgatgtgctg
gtgggtatcaacttactacgtgaaggcctggatatgcctgaagtgtcgctagtggcgatt
ctggacgccgataaagagggcttcctgcgctccgaacgttcactgattcagaccattggc
cgcgcggcacgtaacattaacggcaaagcgattctgtatggggacaaaatcaccccgtcg
atggcgaaagcgattggtgaaactgagcgccgccgtgagaaacagcaacgttacaacgaa
gaaaacgggattacgccgcaagggctaaataagaaagtggtggatgtcctccagcttggc
gaaggcatggcgaaaactaaaggccggatgaagagcaaagcgcgtagcgtgattgaagat
gatgaaatcatcctgacaccaaaagcgttgcagcagaaaatccatcaactcgaagggaag
atgctggagcacgcgcaaaatctggaatttgaagaagccgcgcaaattcgtgaccagctt
catcagttacggcagttgtttattgcaacgtcataa
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integrated database retrieval system
