Baekduia alba: DSM104299_04802
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Entry
DSM104299_04802 CDS
T09120
Name
(GenBank) RNA polymerase sigma factor
Organism
bala
Baekduia alba
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_3
Motif
Other DBs
NCBI-ProteinID:
WCB96048
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Position
4807991..4809490
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AA seq
499 aa
AA seq
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MSLAGPLLRLRTDDQLVALFRAGHDEAFGTIHDRYRPRLFAYARQMLGGSQSDAEDVLQD
VFLRAYNSLRADRRELALRAWLYRVAHNRCIDQLRRPAPAPEDIFDINRGVSTDLLDEAE
RREDLRRLIADVRALPEQQRSALLMREMEGLSYNDLAAALGVTVPAIKSLLVRARVGLVE
AIEARDTACAEIRDDIASALDRGVRATGRTRRHLRECAGCREYRGALRGVEKSLNGLAFP
SGPLTTVMKILGIGGAGSGAAAGGGAVAVGGGGAAGAASAGVATKVVAVVAAAAVVGGGA
AKVEQRVASHPQHRGAIATQAHVKRVAVPAAAALPATQRRTELAPARHGLAPTQAAAAAT
EHGASRAPHVTKLREDVAGPIASAGTDAPKVETTTGGVVAPDDTAPDPTTGATTTDPGGS
GTATAGDGTSSGAASTAPSGTAEAAPGTTPSSSTGSTSPATSTPSASATPGSSPPAGTVS
QTPTAPMAQGASATPPPAG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgctcgcgggtccgctcctgcgattgcgcaccgacgatcagctcgtcgcgctgttc
cgcgcgggccacgacgaggcgttcgggacgatccacgaccgctaccggccgcgcctgttc
gcctacgcgcgtcagatgctcggcggctcgcagtccgacgccgaggacgtgctgcaggac
gtgttcctgcgcgcgtacaactcgctgcgggccgaccgccgcgagctcgcgctgcgggcc
tggctgtaccgcgtcgcgcacaaccgctgcatcgaccagctgcgccgcccggcgccggcg
cccgaggacatcttcgacatcaaccgcggcgtgtcgaccgacctcctcgacgaggccgag
cggcgcgaggacctccggcgcctgatcgccgacgtccgggcgctgcccgagcagcagcgc
agcgcgctgctgatgcgggagatggagggcctgtcctacaacgacctcgccgccgcgctg
ggcgtgacggtgccggcgatcaagtcgctcctggttcgcgcgcgcgtcgggctggtcgag
gcgatcgaggcgcgcgacaccgcgtgcgcggagatccgcgacgacatcgcgtcggcgctg
gaccgcggcgtgcgcgcgaccggccgcacgcgccggcacctgcgcgagtgcgcgggctgt
cgggagtaccgcggcgcgctgcgcggcgtggagaagtcgctcaacggcctggcgttcccg
tcggggccgctgacgacggtgatgaagatcttggggatcggcggcgcgggatcgggcgcg
gcggccggcgggggcgcggtggccgtcggcggtggcggcgccgcgggtgccgcgagcgcc
ggcgtcgcgacgaaggtcgtggccgtcgtggcggccgcggcggtcgtcggcggcggcgcc
gcgaaggtcgagcagcgcgtcgcgtcgcacccgcagcatcggggggcgatcgcaactcag
gcgcacgtcaagcgcgtcgcggtcccggccgctgccgcgctcccggcgacgcagcgccgc
acggagctcgcgcccgcgcggcacgggctggcaccgacgcaggccgccgcagcggcgacc
gagcacggcgcctcgcgcgcgccgcacgtcaccaagctgcgcgaggacgtggcgggtccg
atcgcctcggcgggcaccgacgcgccgaaggtcgagacgaccaccggcggcgtcgtcgcg
cccgacgacaccgcgccggacccgacgacgggcgcaaccacgaccgacccgggcggctcg
ggcaccgcgacggccggcgacggcacgtcgagcggcgcggccagcacggcgccgagcggg
acggccgaggcggcgccggggacgacgccgtcctcctccacgggctcgacctcgcccgcg
acgagcaccccgtcggcctccgccacgccgggctcgagcccgccggccggcaccgtctcc
cagacgcccacggcgccgatggcgcagggcgcgtcggcgacgccgccgcccgccggctga
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