Bacillus sp. LM 4-2: BsLM_1419
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Entry
BsLM_1419 CDS
T03908
Name
(GenBank) ATP-dependent DNA ligase subunit
KO
K10979
DNA end-binding protein Ku
Organism
balm
Bacillus sp. LM 4-2
Pathway
balm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
balm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BsLM_1419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
balm03400
]
BsLM_1419
DNA repair and recombination proteins [BR:
balm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BsLM_1419
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF6058
DUF1631
Ribosomal_60s
Motif
Other DBs
NCBI-ProteinID:
AKE23218
LinkDB
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Position
complement(1383379..1384263)
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AA seq
294 aa
AA seq
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MHTMWKGSISFGLVNIPIKLYAATEDKDIKLRSLHKEDHAPIKYEKVCTNCEKTLSPDEI
VKGYEYVKGKYVVLTDEDLKSLKQEHEEKAVEIVDFVQLQEIDPIYFNRSYFVGPGDNGT
KAYTLLREALRSTGKIGIANMTIRSKQQLAILRVYENCIVMESIHYPDEVRSAAHVPGVP
DQSNVNDKELQTAITLIDELTAEFEPEKYEDTYRQALLQRVNDKLENKETAVTPDKAPPR
EDVIDLVSALQASIDRTRRPNRETPAAAPAQAAEPKGAGDKKQKTTRKKASGTS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcatacaatgtggaagggatcgatcagcttcggattagtaaacatccccatcaagcta
tatgcggccacagaagataaagatattaaactgcgcagcctccataaagaggatcacgca
ccaatcaaatacgagaaagtttgcacaaattgcgaaaaaactcttagtcctgatgaaatt
gtgaagggatatgaatatgtaaaaggaaaatatgtagtgctgacggacgaagatttaaaa
agcttaaaacaggagcatgaggagaaagcagttgagattgttgactttgttcagcttcag
gaaattgatccgatttattttaaccgctcctactttgtcggccccggggataatgggacg
aaggcctataccctgctgcgtgaggcgctgcgctcaaccggaaagatcggtatcgccaat
atgacaatcaggtcaaagcagcagctggcgattctccgtgtttatgaaaattgtatcgtc
atggagtctatccattatcccgatgaggtcagaagcgccgctcatgtcccaggtgtacct
gatcaatcgaatgtaaacgataaggaactgcaaactgctatcacattaatagatgaactg
actgctgagtttgagcctgagaaatatgaagacacgtaccgacaggcgctgctgcaaaga
gtcaacgacaagctagaaaataaagaaacggctgtgactcctgataaagcgccacctcgt
gaagatgtcattgacctggtaagcgctctgcaagccagcatcgacagaaccagaaggccg
aaccgggagacaccggctgccgcacctgcacaagccgctgaaccgaaaggagccggagat
aaaaaacaaaaaacaactagaaaaaaagcctccggcacatcatag
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