Bacillus altitudinis: CFN77_09130
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Entry
CFN77_09130 CDS
T05199
Name
(GenBank) DNA ligase D
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
balt
Bacillus altitudinis
Pathway
balt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
balt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CFN77_09130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
balt03400
]
CFN77_09130
Enzymes [BR:
balt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CFN77_09130
DNA repair and recombination proteins [BR:
balt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CFN77_09130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_ligase_A_M
DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID:
ATH72356
LinkDB
All DBs
Position
complement(1780509..1782374)
Genome browser
AA seq
621 aa
AA seq
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MKPMRLTSAHDIPVGADWLYELKYDGFRAILILEKDTIHLESRAGKRLNEQFPEVIDQCQ
QLTKQLAPFLPLTLDGELVFLLSEQESDFTKVQQRGRLKNTETIQRQAKRFPCHLIAFDL
LKFKGKSLVDLPLIERKAELHEVFQAANLPPSVQLNHPSLLQIIQTDSSPDDMKKIMTTY
LAEGLVAKKKMSKWQEHTRSKEWLKIKNWRYVSVIVTRFDKDNGYFQGCLYQETNLIEVV
QFKHGFSKEEEQTLRTLFLTKGQMTGASHYEIPPSIVAKIACISFDGSALREPRFSSFLF
DADPATCTFQHMLKQLYPLPALIDVTHPEKPVVPALHITKADYLLYLRQAAPYLLPFLRE
RRLTLIRFPHGTGGESFYQKATPDYAPDFVETDQAHDISYTICNDPDTLLWLGNQLAMEF
HIPFETRDTDRPVEIVFDLDPPSVKEFHLAIEAAKRIKVILDGLFLTAFIKTSGGKGLQV
YIPLKKNAFTYEQTRQFTAFICQFLCEQAPELFTLERLKKNRGNRLYLDYLQHDAGKTII
SPYSPRGNELGLVATPIEWEELNSEECHPSLFTMPAVMKRLKEKGDPFRQMRHHVNDDSF
RQVLYQLQDMLPAHKMDIRGH
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgatgcgtttaacgtctgcacatgatattcctgttggagcagactggctttat
gaattaaaatatgacggcttcagggccattcttattttggaaaaagacaccatccattta
gagagcagagccggaaagcgattaaatgaacaatttcctgaagtcattgatcagtgccag
caactaacaaagcagcttgcaccttttttaccgctgaccctagatggagaattggtcttt
ttactgagtgaacaagaaagcgactttacaaaggttcagcaaagaggccgcctgaaaaac
acagaaaccattcaacgccaggctaagcggtttccatgtcatttgattgcatttgatcta
ttgaaatttaaagggaaatccctcgttgatttaccgttgattgagagaaaagctgagctg
catgaggtgttccaagctgcaaatcttcctccctccgttcagctgaatcacccctctctt
cttcaaatcatccaaaccgatagcagccctgatgacatgaaaaaaatcatgacgacatat
ttagcggaaggattagttgctaaaaagaagatgagtaaatggcaggagcatacccgctcg
aaagaatggctcaaaatcaaaaattggcggtatgtatctgtcatcgtgactcgttttgat
aaagacaatggctattttcaaggatgtctttatcaagaaacgaatctcatagaggttgtc
caatttaagcatggtttctctaaagaagaagaacaaaccctgcgcaccttatttctaacc
aaaggtcaaatgactggagcatcacattatgaaatcccaccatccattgtcgcaaagatt
gcctgtatctcttttgatggatcagccttacgagagccccggttttcttcgtttttattc
gatgcagatccagcaacgtgtacctttcaacacatgctcaaacagctttatccgctccca
gctttgattgacgtcacccacccagagaaaccggttgtacctgcccttcatatcacaaag
gcagattacttactttatttgaggcaagccgctccctatttattaccctttttacgtgaa
agacgtcttacgttaatacgctttcctcatggcactggtggagaatctttttatcaaaag
gcaacgcccgattatgcgcctgattttgttgagacagatcaagcgcacgatatttcttac
acaatctgtaatgatcctgacacgttgctttggcttggtaaccagctggcgatggaattt
catattccttttgaaacaagagatacagatcggcctgtagaaattgtatttgatttagat
ccgccttctgttaaagagtttcacctagcaatagaagcagccaaacgaatcaaggtcatt
ttagatggactctttctcactgcatttattaaaacaagtggtgggaaagggctacaagtt
tatatcccattgaagaaaaatgccttcacatatgaacaaactagacaattcactgcgttc
atctgccaatttttatgtgaacaagcacctgagctgtttacgctagagcgtctaaagaaa
aaccgcggcaaccgtttatatttagactaccttcaacatgatgctggaaaaacaatcatc
tccccgtattccccgagaggaaacgagctcggacttgttgcaacaccgattgaatgggaa
gaattaaatagcgaagaatgtcacccttctttatttacgatgccggctgttatgaaacgt
ctaaaggaaaaaggcgacccattccggcaaatgaggcaccatgtgaatgatgattctttt
cgacaagttttatatcagctgcaggacatgttaccagctcataaaatggacatacgcggt
cattaa
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