Burkholderia ambifaria AMMD: Bamb_5224
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Entry
Bamb_5224 CDS
T00398
Name
(GenBank) DNA helicase related protein
Organism
bam
Burkholderia ambifaria AMMD
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
Viral_helicase1
AAA_30
SLFN-g3_helicase
AAA_16
AAA_19
UvrD_C_2
AAA_18
AAA_25
PIF1
AAA_22
UvrD_C
nSTAND3
AAA
ResIII
cobW
NB-ARC
TsaE
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ABI90772
UniProt:
Q0B501
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All DBs
Position
2:2260974..2264144
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AA seq
1056 aa
AA seq
DB search
MTDTASVLRYWRAIEIFCPQSVPKVKPEDKKTPTNDFRAPNAIAPWDKRHAVMRRRIGND
AWRHEVYAGVYPVRALRDLLQEKFGADPDSYDERLDIDTALFCLSVTHDGRVLFDNAVLS
TCAWAWGRTISPGPSASNWLEGYAEFAKKFDSQLRQELALEEGDEAGHKLQADGISVGRP
VTLGDIGKVSAWLLRELHIEMPEISDGMRISSRRVPERYAYEADGADFLNSFFMDDLSLV
ASQVEAGNVGPALHEYLAADGAVDESRRVDVRQKLALPFHSLAPEVFPHGRWPSKGHHPL
VYGQQFAINQLLEQVEQTGGLFGINGPPGTGKTTLLRDLVASVVVSRALALSKLSSPAQA
FTGVASMKAQDKERTVKLWSDALSGFEIVVASANNGAVENVTLDIPGIDAVDASWAQGFD
YFSEFASRVIEKPAWGLLAARLGSKANRAIFRKRFWQDESRESSEASGGDGAEKKPGFSS
WLYSQNSALIDWRAAKTSFQQALDAERKLRAQRQSWFERIGELAKALAREKGFAAEAERR
QQAEINSAIAEEAAAAEHERARIEHESASATLASHASNRPGIIRVVFTLGRAYRNWNARS
RELATVEREARKSKLAAQELADAMVEIQEASTGFRTAAERTLAKEREVVERLRKSLAEAK
QVLGEHFPSFATWHTDDVGREKSSPWVDPAWNAARTRVFMEALNLHKAFVISQAADIGKN
LTALFDVLQGNVPADAAHAAVRAAWQTLFFIVPVVSTTFASLPRLFEHLGREELGWLLID
EAGQAVPQSAVGGIWRAKRAIVVGDPLQLEPVLTIPFSAQQALRGKFDVSETWLPGRLST
QKLADRVATVGTVLVDHERKPLWVSSPLRVHRRCDEEMFRISNKIAYNDMMVFGTEGRKP
FHLPPSAWIHVESADAEGHWIPAEGEMALSILRDVAPETRDKIYVISPFRDVVRGLESLL
HKAKLSNVEVGTIHTVQGKESDVVLLVLGGNPKRPGAKAWASKKPNLLNVAVSRAKRRIY
VIGNRRVWEQFDNFDKCSAILGPQSEWVPPVPSYLQ
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacagcaagcgtactacgttactggcgggcgattgaaattttttgtccgcaa
tccgttccgaaagtcaaaccggaagacaaaaagacacctacaaacgactttcgcgctccg
aacgcgattgcaccgtgggataagcgtcacgctgtgatgcggcgacgaatcggcaacgat
gcttggcggcacgaggtatacgccggggtctatccggtacgtgcgttgcgcgaccttcta
caagagaagttcggggcggacccagactcgtatgacgaacgtctcgacatcgataccgca
ctgttttgcctatcagtaacgcatgacggtcgcgtgctgtttgacaacgctgtgctttcg
acctgcgcgtgggcctggggcaggacgatttcgccgggacctagcgcatccaattggctg
gagggctacgccgagtttgcaaagaaattcgactcgcagctacgtcaggaactggcactc
gaggaaggcgacgaggcgggtcataagctgcaagccgatggcatcagcgtcggacgcccg
gtgactctaggggatatcggaaaggtatctgcttggctgctccgcgagttacatattgaa
atgccggagatatcggacggcatgcgtatttcgtctcgccgggtgcctgagcgatacgcc
tacgaagctgatggagcggacttcctcaacagcttcttcatggacgacctgagcttggtc
gcgagccaggtcgaggcaggtaacgtcggccccgcattgcatgaatatcttgccgccgac
ggtgcagtggacgaatcgagacgtgtagatgttcggcagaagcttgccctgcctttccat
tcgctggcgcccgaagtgtttcctcatggtaggtggcccagcaaaggacatcatccactc
gtctatggccaacagttcgccattaaccaactactcgagcaagtagaacaaacaggagga
ctgtttggcatcaacggccctcccggcacgggcaaaacaacactcttgcgcgacctcgta
gcgtcggtcgtcgtttcgcgcgcattagctctgagcaaactcagctcgcccgcgcaggcg
tttaccggcgtggccagcatgaaggctcaagataaagagcgaaccgtcaagctctggagc
gacgcactatctggattcgaaatcgtcgttgcatcggcaaacaatggcgcagtcgaaaac
gttaccctcgatattcctggcatcgatgcagtcgatgcaagctgggcccaaggtttcgac
tatttcagcgaattcgcatcacgggtcatcgaaaagccagcgtggggactgctcgccgcg
cgccttggaagcaaggccaaccgtgcgattttcaggaagcgattctggcaagacgagtca
cgcgagtcgtcagaggcatctggcggagatggcgctgagaagaagccggggttttccagt
tggctttattcccaaaattcagccctcatagactggagagcggcgaagacgagctttcag
caagcgcttgatgctgaaaggaagcttcgagcacaacgacagtcgtggtttgagcgtatt
ggcgagctcgccaaggcgctggcgcgcgagaagggatttgcggccgaggcggagcgtcgg
cagcaggccgagattaattcggcgattgcagaggaggcggccgccgctgaacacgaacga
gcgcgcatcgaacacgagagcgcttcggcgaccttggcctctcatgccagcaatcgaccg
ggcattattcgagtcgtattcactctcggaagagcgtataggaactggaacgcaaggagt
cgggaactcgcaacggtagagcgcgaggccagaaaaagcaagctggcagcgcaagagctt
gcagatgccatggtggaaatccaggaggcttcaacgggctttcgtactgcggccgagagg
accctggcaaaggagagagaagtcgtcgagcggctacgcaaatctctggctgaagctaag
caagttcttggagaacactttccctcctttgcgacgtggcataccgatgatgtcggacgc
gagaaaagttctccgtgggtcgaccccgcatggaatgctgcgcggacacgcgtcttcatg
gaagccttgaatctccacaaggcgttcgtcatttcgcaagcggcggatatcgggaaaaac
ttaaccgcgctattcgacgtacttcaggggaacgtgccggcggacgctgcgcatgctgct
gtacgcgcggcatggcagacactctttttcatagtccctgtagtctccacgacgttcgct
tcacttcctcggttgttcgaacatcttggtagagaagagctgggatggctcctcatcgat
gaggctggtcaggccgtccctcagagcgccgttggcggaatatggcgtgcaaagcgagcg
attgtcgttggggaccccctgcagctcgagcccgttctcaccattccattcagcgcgcag
caggcattgcgcggcaagttcgacgtgagcgaaacgtggcttccgggtcggctttccacg
caaaagctcgcggaccgcgtcgcgacagtcgggacagtattggtcgaccacgagcgcaaa
ccgttatgggtcagctcgccgttgcgcgtgcatcgtcgttgcgatgaagagatgttccgc
atatcaaacaagattgcgtacaacgacatgatggtgttcggtacagaaggcaggaaacca
ttccacctgccaccttctgcgtggatacacgtcgaaagcgctgacgctgaaggccactgg
ataccggcggaaggagagatggcattgtccatactgcgtgatgtcgcgccagaaacccgc
gacaaaatctacgtgatttcgccctttcgggacgtcgttcgcggactcgagtcgctgcta
cataaagcaaagctttcgaacgtcgaggtcggaacgattcatacggtccaaggcaaggag
tctgacgtcgtgctcctggtgctgggcggaaatccgaagaggcctggtgcgaaggcttgg
gcgtccaaaaagccaaacctgctgaacgtcgcagtcagtcgcgccaagcgaagaatctac
gtgataggcaatcggagggtctgggagcaattcgacaacttcgataagtgttcggccatc
ctcgggccgcaaagcgagtgggttccacctgttccgtcttaccttcaataa
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