Burkholderia ambifaria AMMD: Bamb_5611
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Entry
Bamb_5611 CDS
T00398
Name
(GenBank) Ku domain protein
KO
K10979
DNA end-binding protein Ku
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Bamb_5611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bam03400
]
Bamb_5611
DNA repair and recombination proteins [BR:
bam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Bamb_5611
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GFIT
Motif
Pfam:
Ku
Luciferase_N
Pol_alpha_B_N
DUF3284
Motif
Other DBs
NCBI-ProteinID:
ABI91158
UniProt:
Q0B3W5
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All DBs
Position
3:complement(47129..48136)
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AA seq
335 aa
AA seq
DB search
MAPRMIWKGAISFGLVHVPVQLFPATRTVKPSFRLLDKRSMDPVGYRQINKRTGKEVTRE
DIVRGYEYEKERYVVLTDEEIRAANPESTQTVDILTFVDADAVSFLYLDTPYYLVPDRKG
EKVYALLREALKDSGKIGIALVVMRDRQHLGALIPVGPLLALDTLRWQEELRPLDELSVP
TDDAKHAGVTARELTMAKKLIDDMAGKWTPDEYHDTFRDDILELVERKVRSGKIEEIEDR
PAQTGRAATNVVDLTELLKRSLKGGGGARASDLRDERAEEEAETSSPAGARRKAAAKSAS
KGAAVKSPAKRPAAKRAATGAHAAKKTAVRGKHAA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgcggatgatatggaaaggcgcgatcagtttcgggctcgttcacgtgcccgtg
cagctgttcccggcgacacgcaccgtgaagccgtcgttccggctgctcgacaagcgctcg
atggatccggtcggctatcggcagatcaacaagcgcaccggcaaggaggtcacgcgcgag
gacatcgtgcgcggctacgagtacgagaaggagcgctacgttgtactgaccgatgaagag
attcgcgcggcgaaccccgaatcgacgcagacggtcgacattctcacgttcgtcgacgcg
gacgcggtgtcgttcctgtatctcgacacgccgtactacctcgtgccggaccgcaagggc
gagaaggtctatgcgctgctgcgcgaggcactgaaggacagcggcaagatcggcatcgcg
ctcgtcgtgatgcgcgaccgccagcatctcggcgcgctgattccggtcgggccgctgctc
gcgctcgacacgttgcgctggcaggaggaactgcgcccgctcgacgaactgtcggtgccg
acggacgacgcaaagcacgcgggcgtgaccgcgcgcgagctgacgatggcgaagaagctg
atcgacgacatggcgggcaagtggacgcccgacgagtatcacgacacgttccgcgacgac
atcctcgaactggtcgagcgcaaggtgcgctcgggcaagatcgaggaaatcgaggaccgg
ccggcgcagacgggccgtgccgcgaccaacgtggtcgacctcaccgagctgctcaagcgc
agcctgaagggcggcggtggcgcgcgcgcatcggacctgcgcgacgaacgcgcggaagag
gaggccgagacgtcgtcgcctgccggcgcgcgtcgcaaggcggctgcgaaatccgcgtcg
aaaggcgcggccgtgaagagtccggcgaagcggccggccgcgaaacgcgcggcgacgggc
gcacatgcggcgaagaaaaccgccgtgcgcggcaagcacgccgcatga
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