Bacillus velezensis UCMB5113: BASU_2575
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Entry
BASU_2575 CDS
T02796
Symbol
dnaE
Name
(GenBank) DNA polymerase III (alpha subunit)
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bamn
Bacillus velezensis UCMB5113
Pathway
bamn03030
DNA replication
bamn03430
Mismatch repair
bamn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BASU_2575 (dnaE)
03430 Mismatch repair
BASU_2575 (dnaE)
03440 Homologous recombination
BASU_2575 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bamn03032
]
BASU_2575 (dnaE)
03400 DNA repair and recombination proteins [BR:
bamn03400
]
BASU_2575 (dnaE)
Enzymes [BR:
bamn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BASU_2575 (dnaE)
DNA replication proteins [BR:
bamn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BASU_2575 (dnaE)
DNA repair and recombination proteins [BR:
bamn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BASU_2575 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
CDG26865
LinkDB
All DBs
Position
complement(2767835..2771173)
Genome browser
AA seq
1112 aa
AA seq
DB search
MSFVHLQVHSGYSLLNSAASVKELVTQAKELGYSSLALTDENVMYGAIEFYKACKSNGMK
PIIGLTASIYTDDTELEAHPLILLAETNTGYQNLVKISSALQSMAKGGMKRKWMKSYHEG
LIAITPGENGYIESLLQAGKFEEAVRAAEGFRELFGDGRFYLGYQPFKGHETLSEEILRL
SAETEIAVCAAGDVRYIKKEDQDAYRCLCAIKAGEKWEDQSGNLPDLYLRTPEEMAELYT
QHPEAIEAAARIARQCRVDVSLGQTQLPSFPAPDGKSADDYLAEICHEGLRLRFGTPDER
AVRRLEYELDVIRRMKFSDYFLIVWDFMKYAHEKGIVTGPGRGSAAGSLVAYSLFITDVD
PLKHSLLFERFLNPERISMPDIDIDFPDTRRDEVIQYVQNKYGAMHVAQIITFGTLAAKA
ALRDTGRVFGISPKEADQLARLIPSKPGMTLEEARRQSAQLNRRLSESAVLHKVFQIARK
IEGLPRHTSTHAAGVVLSKEPLSEVVPLQEGHDGVYLTQYAMDHLEDLGLLKMDFLGLRN
LTLIESIKTMIEKETNTKIDFSEISYQDEKTFSLLSNGDTTGIFQLESSGMRNVLKRLKP
SRLEDIVAVNALYRPGPMENIPLFIERKHGRARVEVPHEDVRNILSDTYGVIVYQEQIMM
IASRMAGFSLGEADLLRRAVSKKQKDILDRERSHFVEGCLKKEYSVVTANEVYDLIVKFA
NYGFNRSHAVAYSMIGYQLAYLKAHYPLYFMCGLLTSVIGNEDKISQYLHEAKGSGIQVL
PPSINKSGFPFAPENGAVRYSLRAVKNVGVSAVKDIYKARTHKPFEDLFDFCFRVPAKSV
NRKTIEALIFSGAMDEFNQNRAALLASVDVALEHAELFRADDDQMGLFLEESFSIKPKYV
EAEEFPLVDKLRFEKEALGVYFSSHPLSAFRDLLNKRGAQAITAARQMPKGQLSIGALLA
GIKTIRTKTGQHMAFLTLSDETGEMEAVVFPDQYRRLSPLLKEGALLFAAGKMEERQEKT
QFIMSSASLLEQTEADRAPSVYIKIEGSRHNQEFLEKMKRILLEHKGETGVYLYYEKDKQ
TIRLPDTFHIQADHQALYRLKELLGRENVVLK
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttttgttcacctgcaagtacatagcggctacagtctgttaaacagcgccgcttct
gtaaaagagcttgttacacaagcgaaggaactcggatattcatcattggcgctgacggac
gaaaatgtgatgtacggcgccattgagttttataaagcatgcaaatcaaacggaatgaag
ccgattatcggtctgacggcttctatatacacggacgatacggagcttgaagcacacccg
ctcattcttttagcagagacaaacaccggatatcagaacctggtgaaaatctcaagtgcg
ctgcaatccatggcaaagggcggcatgaagcgaaaatggatgaagagctatcatgagggg
ctgatcgccattacgcccggtgaaaacggctacattgaaagcctgcttcaagccgggaag
tttgaagaagcggtccgggctgccgaaggattccgggagctgttcggagacggccgtttt
tatttagggtaccagccgtttaaaggacatgagacgttatcagaagagattctccgcctg
tcagccgagacggaaatcgctgtctgcgctgcgggggatgtccgatatatcaagaaagaa
gatcaagatgcgtaccgctgtctgtgcgctattaaagccggagagaagtgggaggatcag
agcgggaatctgccggacttatacttgaggacgcctgaagaaatggcagagctttacacg
cagcatccggaagcgattgaagcagccgcgcgtatcgcccggcaatgccgggtcgatgtc
agcctcggacagacacagcttccgtcttttccggcgccggacggcaaatcagctgatgac
tatttagcggagatctgtcatgaggggctgcgcctccgtttcggcactcctgatgagcgc
gctgtccgccggcttgaatatgagctggacgtcatcaggcgcatgaaattcagtgattat
tttctcatcgtatgggactttatgaagtacgcgcatgaaaagggcattgtgacaggcccg
ggaagggggtccgcggcaggctcgcttgtcgcttactcccttttcattaccgacgtggat
ccgcttaaacattctctgctgtttgagagatttcttaatcccgagcggatcagcatgccg
gatatcgatatcgatttccctgatacgagaagggatgaggtcattcagtatgtacaaaat
aagtacggggccatgcacgtcgcccagattatcaccttcgggacattggccgcaaaggcg
gcgttaagggataccgggagagtgttcggaatcagcccgaaagaagccgaccagcttgcc
cgcctgattccgtcaaaaccgggaatgacgcttgaggaagcgaggcggcagtccgctcag
ctgaacaggaggctgtccgaatccgccgttcttcataaagtgtttcagatcgcaaggaaa
attgaaggtcttccgcggcacacgtcaacacacgcggcgggggtcgttctcagtaaagag
ccgctttcggaagttgtccctcttcaagaggggcatgacggcgtgtatttaacgcagtat
gcgatggatcacttggaagatctcggtcttttaaaaatggactttttaggtttgcgcaac
ctgacgcttattgaatccattaaaacgatgattgaaaaagagacgaatacgaaaattgat
ttttccgagatttcttatcaggatgaaaaaacgttctcgctattgtcaaacggtgatacg
acgggtattttccagctggaatcatcaggaatgagaaacgtgctgaagcgcctgaagccg
tcaagactggaagacattgtcgcggttaacgcgctttacaggccgggaccgatggaaaat
attccgttatttatcgagcggaagcacggccgcgcgcgtgtggaagtgccgcacgaggac
gtaagaaatattctcagtgacacttacggcgtcatcgtctatcaagagcagataatgatg
atcgcctcgcgcatggcagggttttcattaggtgaagcggatctgctcagacgggctgtc
agcaaaaagcaaaaggacattctggacagagagcgaagccattttgttgaagggtgctta
aaaaaggagtattctgtagtcactgcaaacgaggtctacgatctgattgtaaaattcgct
aactacggattcaacagaagccatgctgtcgcatacagcatgatcggctatcagctagcc
tatttaaaagcgcattatccgttatattttatgtgcgggctgttgacgagcgtcatcggc
aatgaggacaaaatatcgcaatatctgcatgaagcgaaggggagcgggattcaagtcctt
ccgccgtcaataaacaaaagcggttttccgtttgcgccggaaaacggagccgtcagatac
agtttgcgggccgttaaaaacgtaggcgtctcggcagtgaaagatatttataaagcaaga
acacataaaccgttcgaggatcttttcgatttctgctttcgcgtacccgcaaaaagcgtg
aatcggaaaaccatcgaagcccttatattttctggggccatggacgaattcaatcaaaat
cgcgccgccttgctggcctccgttgatgtggctttagagcacgctgaactttttcgtgca
gacgatgaccaaatgggattgtttttggaagaatcgttctccattaagccaaaatatgta
gaggctgaggaatttccgctcgtggacaagcttcggttcgaaaaagaagctctcggtgtt
tatttctcaagccatcctttgtctgctttcagggatctcctgaacaaacggggggcgcaa
gcgatcacagcagcgcggcagatgccgaaggggcagctgtcaatcggcgctttgctcgcg
ggcatcaaaacgattcggacaaagacaggtcagcatatggcgtttctcacattaagcgat
gaaacgggagaaatggaagccgtcgtgtttcctgaccaatatagaaggctgtctccgctg
ttaaaggaaggcgcgcttttattcgccgccggaaaaatggaagagcgtcaggagaagaca
caattcatcatgtcatccgcctctcttcttgagcagacggaggcagacagagcgccgtct
gtttacatcaaaatcgaaggcagccggcacaatcaggagtttttggaaaagatgaagcgt
attttactggagcataaaggggaaaccggcgtttatctttattatgaaaaagacaagcag
acgatcaggctgccggatacttttcatattcaggcggaccatcaggcgttataccgttta
aaagagctgctgggccgcgaaaacgtcgtgttaaaatag
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