Bacillus velezensis SQR9: V529_00320
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Entry
V529_00320 CDS
T03384
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bamy
Bacillus velezensis SQR9
Pathway
bamy03030
DNA replication
bamy03430
Mismatch repair
bamy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V529_00320 (holB)
03430 Mismatch repair
V529_00320 (holB)
03440 Homologous recombination
V529_00320 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bamy03032
]
V529_00320 (holB)
03400 DNA repair and recombination proteins [BR:
bamy03400
]
V529_00320 (holB)
Enzymes [BR:
bamy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V529_00320 (holB)
DNA replication proteins [BR:
bamy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V529_00320 (holB)
DNA repair and recombination proteins [BR:
bamy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V529_00320 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
DUF5073
Motif
Other DBs
NCBI-ProteinID:
AHZ14058
LinkDB
All DBs
Position
41767..42756
Genome browser
AA seq
329 aa
AA seq
DB search
MAISWKEMTGQQPRVMRLLHNSIEKKRLSHAYLFEGKKGTGKLDAALLLAKSFFCLEGGT
EPCGECRNCKRIESGNHPDLHVVQPDGLSIKKAQIQSLQEEFSKTGLESHKKLYIISHAD
QMTTNAANSLLKFLEEPSQDTIAILITEQLHRILDTIVSRCQVLPFQPLQPKAIEERLIE
QEVGPHMARLLANMTNNIAEAVELSRNDEFAESRAKVIKLYEVLHQRKGHAFFFIQDQWV
PFFKEKTHQEMGLDMLLLIYRDVLSIQIGNEDKLIYQDLFQSIKQHALQFTQQSVTNQIL
AVLEAKKRLHSNVNVQGLMEHLVLTLQEG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcaatatcatggaaggaaatgaccgggcagcagcccagagtgatgcggcttttgcat
aacagtattgaaaagaaaaggctttctcacgcatatctgtttgaaggtaaaaaaggtacg
ggcaaattggatgccgcactgcttctcgcaaaaagttttttttgccttgaaggcgggact
gagccttgcggggagtgccggaactgtaagcgcatcgaatccggaaaccatcccgacctg
catgtggttcagcccgacggattatccattaaaaaggctcagatccaatcgcttcaggaa
gagttttctaaaacaggactggaatcgcataaaaagctgtacattatatcccatgcggat
caaatgacgacaaatgcggcaaatagtctgctgaaattcttagaggagccgagtcaagac
accatcgcaattctgattactgaacagctccaccgaatactggataccatcgtttcgaga
tgtcaggttcttccgttccagccgcttcagccgaaagccatagaagaaaggctgattgaa
caggaagtgggccctcacatggcccggctcttagcaaatatgacaaataatattgcggaa
gcagtcgaattaagtcgaaatgatgagtttgcagagtccagagcgaaagtgataaaattg
tatgaagtcttacatcagcggaaaggacatgcctttttcttcattcaggatcagtgggtg
ccctttttcaaagaaaaaacccatcaagaaatgggtcttgatatgctcttattgatatac
cgtgatgtattatccatccaaattggaaatgaagataaactgatttatcaagacttattc
caatcaataaaacagcatgcgctgcaatttacacaacaaagcgttacgaaccaaattctc
gctgttttagaagcaaaaaaacggcttcattccaatgtgaatgtgcagggattaatggag
cacttggtgttaacgttgcaggagggataa
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