Bicyclus anynana (squinting bush brown): 112044243
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Entry
112044243 CDS
T07476
Name
(RefSeq) DNA ligase 4 isoform X2
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
112044243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bany03400
]
112044243
Enzymes [BR:
bany01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
112044243
DNA repair and recombination proteins [BR:
bany03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
112044243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
TPR_14
BRCT
RNA_ligase
DNA_ligase_IV
TPR_1
TPR_8
TPR_2
TPR_19
TPR_11
ANAPC3
TPR_6
BRCT_2
TPR_12
TPR_MalT
TPR_16
RTT107_BRCT_5
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
112044243
NCBI-ProteinID:
XP_023935782
EnsemblRapid:
LOC112044243
UniProt:
A0A6J1MSB0
LinkDB
All DBs
Position
1:15121319..15137034
Genome browser
AA seq
1324 aa
AA seq
DB search
MDVDSSEGSSAPSRADRDDEMDVDQALTNKFLSGEMSFAEYSSEWYRAEDEEDTEAERNE
DGDEAAQSVQVTEKSFQRKRRNTRLSAALVGLMGEANIRFARGDLEMAERMCHEIIKQLP
TAAEPYQTLAQIYENDVDKSLQFSLLAAHLGRADAEEWWRLAAICKQRDDKKQEMICYTQ
AIKADPHNMGAHMKRLDFLNALEEMKYPVNTLNVTRVKCYHKIVSSLPASEGELIMQYAK
MAVTSYHNSEEIERAHEVMATAYTKCASLFTIEDINIYLELLISVKQYQTCIEVFVSNVG
VEIEAEIQTIKNANGEIEEHTNYLSCVIPSKMAIDLKSKLLVCFIHLGSLSLVETLLSDF
LSNDVDKAGDLYMDIEEAFSSVGHYEMAIKLLEPLVRNTNFDLGAVWLKHAECLYKLGRV
DEAVESYYKVLKLVPQHPNARKKLFSILEKKGLIEDALNILQQDYKYVVSASLLYEQCQA
LKKYNKPLKYLEDSTFFPILRLLLPDCERERGAYNLKETKLGALLVKVLSLNKQSADAQK
LLNFRSIHSSTNESDFASVAYFVLNNRAQQTTPQLKVGAVNEILDKIAKDEVGNKAPILD
EAFSYAITKLTPQEFKWFLRIILKDLKLSMSTHRILSCFHPDAPELYRNCSDLHKVCDEL
EDGDARPLELGVQLFFAVRPMLSERMDVTHIHLAPNKANHVEDKFDGERFQMHMDNNTFE
YYSRKGFTYSKKYGKTFESGILTPDLRTCFSSNAHNFILDGEMMGWHKEKQCFGSKGMAY
DIKKITENSSYRACYCVFDILYYNGRSLVGPPDKGGLPLNERLAILDDLFTDVPGVIQHS
QRETVKHVSDVVNAINKAIDNQDEGVVLKDVNSYYIPAQRNAGWFKIKPEYTEGTMTDLD
LVIIGAEEAVNKRQGRAKSFFVACADVQSGDNNRRWVCVGQVASGVTYQEKERLCALLEK
NWRVSRNAPPPPCLEFNKKKPDFWILPEHSVALQVRATELVRGSEYGSTYSLRFPRVERI
RDDKPVADIMTLEHFNQLISTSNSVIKLSTKRIADSSIEPMERKIKRPSKALQVSDKFRT
KLTEDVAVTSKALLGRKLCVLSDDEDCKKVDLVRIIQSHGGKHVENSGPDTWCCVAGTIT
FKIRKLIELQSEDIITTSWLRSLPASDSLCSLSPLDMLSIKYETKMNLCMEYDTFGDSYK
EELDENTLRKCFAKMESTRRPIYLLTREMLELDRQLFGQNNPFSFLRGCTIHVRNPLYAT
LARGYGAKVTDEPSIATHVVVPTGTKTEDMDNLDINKETNVVSEDWLKQCFKENARVSET
EYLL
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagattcatcagaaggaagttctgcaccatcacgtgctgatagagatgatgag
atggatgtggaccaagctttgaccaataaatttttaagtggagagatgtctttcgctgag
tattcaagtgaatggtaccgcgctgaagatgaagaggacacggaagccgaacgaaatgaa
gatggcgatgaggctgcacaatcagtacaagtaactgagaaatcttttcaaagaaagcgg
aggaacacgcgcctttctgcagcactggttggtctaatgggtgaggcgaatatacgattc
gcgcgtggtgatttggaaatggcggaacgtatgtgccatgaaattataaagcaattgcct
acagctgcagagccttaccaaacgttagctcaaatatatgagaatgatgtggataaatcc
ttgcagttctcattgcttgctgcacatctcggtcgagctgatgctgaggagtggtggcgg
ctcgctgctatatgtaaacagagagatgacaagaaacaagaaatgatttgctatacacag
gccatcaaggctgaccctcataacatgggagcccacatgaagaggcttgacttcttaaat
gctttggaagaaatgaagtatccagtgaatactttaaatgttacaagagtaaagtgttat
cacaagattgtcagttctttaccagccagtgaaggagaactaataatgcaatatgctaaa
atggcagtcacttcgtaccacaacagtgaagaaatagaaagagcgcatgaggttatggct
acagcttacactaaatgtgcatcattatttactatagaagatataaacatttatttagaa
ttgcttatttctgttaaacagtatcagacttgtatagaagtttttgtgtcaaatgtaggt
gttgaaattgaagccgagatacaaactattaagaatgctaatggagaaattgaagaacac
acaaactacctgagctgtgtaattcccagtaaaatggccatagatttaaaaagtaaatta
ctggtttgctttattcatttgggctctttgagccttgtagagacactattgagtgacttt
ctgagtaatgatgtagataaagctggagatctatatatggacatagaggaagcgttctct
tcagtgggccattacgagatggccattaaattacttgagccattagtgagaaatactaat
tttgatttaggagctgtgtggctaaaacatgcagaatgtttgtacaaattaggaagagtg
gatgaggctgttgagtcttattacaaagtattaaaacttgttccacagcatccaaatgct
cggaagaaattgttcagcatacttgaaaagaaaggactcattgaggatgcattaaatatt
ttgcaacaagattataaatatgttgtcagtgctagcttattgtatgagcaatgtcaagcc
ctgaaaaaatataacaaaccattaaagtatttggaggattcgacatttttccctattctt
agattactgctacctgattgtgaacgtgaaaggggtgcatataatttgaaagagaccaaa
cttggtgctttattggtaaaagtattatctctgaataaacaatctgcggatgcgcaaaag
ttgttgaattttcgctcgattcattcctcgacaaatgaaagtgactttgccagcgtggcg
tacttcgtcttgaataacagagcgcaacaaactaccccgcaattgaaagttggcgctgtt
aacgaaattttggacaaaattgctaaagatgaagttggaaacaaagctcctatcctggat
gaggcgttcagttacgctataacaaaattaacacctcaagagttcaaatggtttcttcga
attatattgaaagatttgaagctcagcatgagtacacatcgcatattgtcttgttttcat
ccagacgcccctgaactgtatagaaactgtagtgatttgcataaggtttgtgacgagttg
gaagatggtgacgctcgaccattggagctcggcgtgcaactgttctttgcggtgcgaccc
atgctgtccgagcgcatggatgtcactcatatacacctcgccccgaacaaagcgaaccat
gtcgaagataagtttgatggggaaagatttcagatgcatatggataacaacactttcgag
tattattcgagaaagggtttcacatattcgaagaagtacggcaaaacgtttgaatctggc
atactaacgcccgatttgaggacttgtttttcatcgaacgctcacaatttcatacttgat
ggtgaaatgatgggttggcataaggaaaaacaatgcttcggctcaaaaggcatggcctac
gacataaagaagataactgaaaattcatcgtatcgcgcctgttactgtgtgttcgatatt
ttgtactacaacggtcggtctctggttgggccaccagacaaaggtggcttgcctcttaac
gagagactcgcaatattggacgacctcttcacagacgtgcccggggtcatacagcacagt
caacgtgaaactgttaaacacgtttcagatgtggtgaatgccatcaacaaagccattgac
aaccaggacgagggcgtcgtgctcaaagacgtcaactcctactacatccccgcgcaacgc
aacgctggctggttcaagattaaacccgagtacaccgagggaactatgacggacttagat
ttggtaataattggagcggaggaagccgtaaacaagagacaaggacgagccaagagcttt
tttgtcgcttgcgctgacgttcagtcgggtgacaataatcgtcgctgggtgtgcgtgggc
caagtagccagcggtgtcacctaccaggaaaaagaacgcctgtgtgctctattggagaag
aactggcgagtctcgaggaacgcgccgccgcccccgtgtctggaattcaataaaaagaag
ccggacttttggatattgcctgaacattccgtggcactgcaagttcgtgccacagagttg
gtgcgaggttctgagtatgggtccacctattccctgcgtttcccgcgcgtcgagcgcatt
cgcgacgacaagccggttgccgacatcatgactctggagcacttcaaccaactcatttct
acaagcaactcagttatcaagttgagcacaaaacgcatagccgactcatcaatcgagccg
atggagagaaagataaaaaggccaagcaaagcgctgcaagtgtcggacaaattccgcaca
aaactgaccgaagacgtcgcggtgacatccaaagcgctgctcggacggaaactatgcgtg
ctatcagatgacgaggactgcaagaaagtggatttggtgcggatcatacagtcgcatggc
ggcaaacatgtcgaaaatagcgggcctgatacgtggtgttgtgtggctggtactataact
tttaaaattcgcaaactgatagagttacaaagtgaagacattatcaccacttcctggctt
cgatctctacctgcttcagacagtctgtgctcgctgtcgcctttagacatgctgtctata
aaatacgaaactaaaatgaacttatgcatggaatatgacacgtttggagacagttataaa
gaagaattagacgaaaacacactgagaaaatgtttcgccaaaatggagtcaacaagaagg
ccaatatatttattgactcgggaaatgctagaactcgataggcagctattcggacaaaac
aaccctttctccttcttacgtggctgtaccatacatgtgaggaaccccctgtacgcgact
ttggcacgagggtatggggccaaagttaccgatgaaccctctattgccacccatgtggtc
gtaccaactgggacgaagaccgaagacatggacaatttggatataaataaagaaacgaat
gtagtaagtgaagactggttgaaacagtgttttaaagaaaatgcaagggtttccgaaacc
gaatatttgttgtga
DBGET
integrated database retrieval system
