Buchnera aphidicola 5A (Acyrthosiphon pisum): BUAP5A_289
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Entry
BUAP5A_289 CDS
T00820
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bap
Buchnera aphidicola 5A (Acyrthosiphon pisum)
Pathway
bap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BUAP5A_289 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bap03400
]
BUAP5A_289 (mfd)
Enzymes [BR:
bap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BUAP5A_289 (mfd)
DNA repair and recombination proteins [BR:
bap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
BUAP5A_289 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
Helicase_C
CarD_TRCF_RID
MFD_D3
ResIII
UTP15_C
ERCC3_RAD25_C
dATP-dGTP_PPHyd
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
ACL30657
UniProt:
A0A7U3YAD9
LinkDB
All DBs
Position
complement(323796..326234)
Genome browser
AA seq
812 aa
AA seq
DB search
MKITKNKILKNKKIINFKYQKLLDLFYNVNNQKKNNQLLSYLYSFSGKIIFSLTEEKSLK
KILRFLMRHKIHPQYIKRIIDIKKEIDYFYMIEEIKNGFIDKKNNILFLCTKDLLPILID
DKYIGNIKKNTNNINKFNLSQLILNHPVMHIEHGIGRYKGLTTIETASIQSEYLVISYAE
GDKLYVPVSNLHLVSPYTGTSIENAPLHKLGGDDWNKEKHKISKTVYDHAAQLLHIYAKR
ESKTGFSFKKNIEKYDLFCNDCSFKTTSDQNEVMKFVLKDMSKPIPMDRLICGDVGFGKT
EIAMRASFLAVSNKKQVAILVPTTLLAQQHYKNFKIRFSNWPVNINILSRFQTQKEQDLI
FKHTKNGRINIIIGTHKLLFKNIEWCSLGLLIIDEEHRFGVSHKEIIKKIYSNIDILTLT
ATPIPRTLNMAMTGIKDLSIIAKPPAQRLAIKTFIQEYSPILIRKTILREISRGGQVYYI
YNKVQNIMNIAERLSILIPEASIKIGHGQMKNIDLKKVMNEFYNNKFNVLICTTIIESGV
DIARANTIIIENSDHFGLSQLHQLRGRIGRSNNQAYALLLVNNFNKITSDAKKRLEAISS
VDNFGGGFSLSNQDLEIRGVGEILGKEQSGHIKNIGFSLYMDLLKNAIDLLKNGKIFSVE
KSLKKPLEIDLHVSSLLPSSYILDINTRLFFYKKLANAIHEKQIEEIKYELIDQFGKLPD
FSKNLILIAKIRLIADKIGIKYIKSNNNIGIIEFNDYGSINTEYLLKMFQKEPKIWKMET
STRIKFILHLKNDYLRLKWIINLLRNLFKKNI
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattacaaaaaataaaattttaaaaaacaaaaaaattattaattttaaatatcaa
aaattactagatctattttataatgtaaataatcaaaaaaaaaataatcagttattgtcc
tatttatattcattttcaggaaaaataatattttctttgacagaagaaaaatctttaaaa
aaaattttaagatttttaatgagacataaaatacacccacaatatattaaaagaattatt
gatattaagaaagaaattgattatttttacatgatagaagagatcaaaaatggatttata
gataaaaaaaataatattttatttctttgtacaaaagatttgttgccaatattaattgat
gataaatatattggtaatataaaaaagaatactaacaatattaataaatttaacttatct
caattgattttaaatcatccagttatgcatattgaacacggtattggaaggtataaagga
ttaacaactatagaaactgctagcatacaatctgaatatcttgttatttcatatgcagaa
ggggataaattatatgtaccggtttcaaatctacatcttgtctcaccttataccggaaca
tctatagaaaatgctcctcttcacaaattaggtggtgatgattggaataaagaaaaacat
aaaattagtaaaacggtttacgatcatgcagcacaattactacatatttatgcaaaaaga
gaatctaaaacaggtttttcatttaaaaaaaacatagaaaaatatgacttgttttgtaat
gactgttcttttaaaacaacatcagatcaaaatgaagtaatgaagttcgtactaaaagac
atgtctaaaccaattcctatggatcgtttaatttgtggtgatgtcggtttcggaaagact
gaaatagcgatgcgtgcttcttttttagctgtatctaataaaaaacaagtagctatttta
gtgccaactactttattagcacaacaacactataaaaatttcaaaattcgtttttctaat
tggcctgttaatattaatatattatctagatttcaaacacaaaaagaacaagatttaatt
tttaagcatactaaaaacggacgaattaatataataataggtactcataaactgctattt
aaaaatatagaatggtgtagtctcggactattaattattgatgaagaacataggtttggc
gtgagtcataaagaaattataaaaaaaatatattctaatattgatatactgactttaaca
gctacgcctatacctcgtactttaaatatggctatgactggtataaaagatctatctatt
atagcaaaacctccagctcaaagattggcaattaaaacttttattcaagaatatagtcct
atattaataagaaaaacaatactacgtgaaatatcaagaggcggtcaagtttattatata
tataataaagttcaaaatatcatgaacatcgctgaaagattatcaatattaattcccgaa
gctagtattaaaataggtcatggacaaatgaagaatatagatttaaaaaaagtcatgaat
gaattttacaacaataaattcaatgtcttgatttgtactacgattattgaaagtggtgtt
gatatagcaagagctaatacaattattattgaaaattctgatcattttggattatctcaa
ttacatcaacttcgcggacgtattggtcgatcaaataatcaagcatatgctttattactt
gtcaacaattttaataaaatcacttcagatgccaaaaaaagattagaagcaatttcatca
gttgataattttggaggaggtttttctctatctaatcaagatttagaaattagaggagta
ggtgagatactaggtaaagaacaaagcggacatataaaaaatataggtttttctttatat
atggacttgttgaaaaatgctattgatttactaaaaaatggaaaaattttttctgttgaa
aaatcattaaaaaaaccattagaaattgatttacatgtatcttccctactacctagtagt
tatatattagacattaatacaagattatttttttataaaaaactcgccaacgctatacat
gaaaaacaaatagaagaaataaaatatgaactaattgatcaatttggtaaactacctgat
ttttctaagaatttaattctaattgctaaaattcgattaatagcagataaaattggtatt
aaatatattaaatctaataataacataggcataatagaatttaatgattatggttctata
aatactgaatatttactgaaaatgtttcaaaaagaaccaaaaatctggaaaatggaaact
tctacaagaataaaatttattttgcatttaaaaaatgattatttgcgtctcaagtggatt
attaatttattaagaaatttatttaaaaaaaatatttaa
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