Burkholderia arboris: NLX30_30925
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Entry
NLX30_30925 CDS
T08608
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bari
Burkholderia arboris
Pathway
bari03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bari00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NLX30_30925
09124 Replication and repair
03420 Nucleotide excision repair
NLX30_30925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bari03021
]
NLX30_30925
03400 DNA repair and recombination proteins [BR:
bari03400
]
NLX30_30925
Enzymes [BR:
bari01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NLX30_30925
Transcription machinery [BR:
bari03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NLX30_30925
DNA repair and recombination proteins [BR:
bari03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NLX30_30925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
GlgS
Motif
Other DBs
NCBI-ProteinID:
UTV57504
LinkDB
All DBs
Position
pla_1:complement(2804315..2806615)
Genome browser
AA seq
766 aa
AA seq
DB search
MSYVVAVRAMCEFTARRGDLDLRFTPAPTALEGIAGHGAVTSKRGARYETEIALTGTWGT
LTVRGRADGYDPVANRLEEIKTYRGSLDAMPDNHRALHWAQAKVYAHLMCDARGLKEIDV
ALVYFDIVSERETKLTETLDAGTLATFFAEQCACFVGWAERETAHRAARDAALRALAFPH
GRFRSGQRELAVSVYRAARDEHCLMAQAPTGIGKTLGTVFPMLKACGEGELDHVFFLTAK
TPGRALALEAAATLGAGTPALPLRVLELVARDKACEHPESACHGESCPLAKGFYDRLPAA
RDAAIEAGLLDRDAVRTAALAHDVCPYYLSQELARWSDMVIGDYNYYYDGSAMLHTLAQQ
NQWRVGVLVDEAHNLLDRARKMYSASLDPFAFAAAREAAPTALRKAFDRLARAWGTVNRA
QTERYAAYPDVPGPIVSAVQNLVAAIGEHLTDAPRANGDALLRFHFEAIQFGVLAEAFDS
ASIFDATLHGEPMPRQPALDGVVSAHRRRRVQSTLCVRNVIPAGFLAPRYDAARATVLFS
GTLSPFHFYRDTLGLPGDTGWLDVDGPFRAEQLTVRVASHVSTRWRDRDRSLEPIADLIA
AQYATRPGNYLGFLSSFDYLGRVVALMQTRHPDVPVWAQAPGMAESERDAFLARFDAGGR
GVGFAVLGGAFSEGVDLVGERLIGAFIATLGLPQVNDVNEQMRQAMEARFGNGYDYMYLY
PGLQKVVQAAGRVIRTEHDEGVVHLIDDRYRRREVRDLLPRWWRIG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgtcgtcgcggtgcgggcgatgtgcgagttcaccgcgcggcgcggcgatctc
gacctgcgcttcacgcccgcgcccacggcgctcgaaggcatcgccggccacggcgcggtc
acgtcgaagcgcggcgcgcgctacgaaaccgaaatcgcgctgacgggcacgtggggcacg
ctcaccgtgcgcggccgcgcggacggctacgatccggtcgcgaaccgtctcgaggaaatc
aagacctaccgcggcagcctcgacgcgatgccggacaaccaccgcgcgctgcactgggca
caggcgaaggtctatgcgcacctgatgtgcgacgcgcgcggcctcaaggaaatcgacgtc
gcgctcgtgtatttcgacatcgtgtccgaacgcgagaccaagctgacggaaacgctggat
gccggcacgctcgcgacgttcttcgccgagcagtgcgcgtgcttcgtcggctgggccgag
cgcgagacggcccatcgcgcggcgcgcgatgcggcgctgcgcgcgctcgcgtttccgcac
gggcggttccgcagcggccagcgcgaactggcggtctcggtctatcgcgccgcacgcgac
gaacactgcctgatggcgcaagcgccgaccggcatcggcaagacgctcggcaccgtgttt
ccgatgctgaaggcgtgcggcgagggcgagctcgaccacgtgttcttcctgaccgcgaaa
acgcccggccgcgcgctcgcactcgaagcggcggcgacgctcggcgccggcacgcccgca
ctgccgttgcgcgtgctggaactcgtcgcgcgcgacaaggcgtgcgagcatccggaaagc
gcgtgccacggcgaatcgtgtccgctcgcgaagggcttctacgaccggctgcccgccgcg
cgcgatgcggcgatcgaggccgggctgctcgatcgcgatgccgtgcgtacggccgcgctc
gcgcacgacgtctgtccgtactacctgtcccaggaactcgcgcgctggtcggacatggtg
atcggcgactacaactactactacgacggcagcgcgatgctgcatacgctcgcgcagcag
aaccagtggcgcgtcggcgtgctcgtcgacgaagcgcacaacctgctcgaccgcgcgcgc
aagatgtacagcgcgtcgctcgatccgttcgcgttcgcggccgcacgcgaagccgcgccg
acggcgctgcgcaaggcattcgaccggctcgcccgcgcgtggggcacggtcaatcgcgcg
cagaccgagcgctatgcggcctatcccgatgtcccgggcccgatcgtgtcggccgtgcag
aacctcgtcgcggcgatcggcgaacacctgaccgacgcgccgcgcgcgaacggcgacgcg
ctgctgcggtttcatttcgaggcgatccagttcggcgtgctcgccgaagccttcgacagc
gcctcgatcttcgacgcaaccctgcatggcgagccgatgccgcgccaaccggcgctcgac
ggggtcgtatcggcgcatcgacgccgccgcgtccagtcgacgctgtgcgtgcgcaacgtg
atccctgccggtttcctggcgccgcgctacgacgccgcgcgcgcgaccgtgctgttctcg
ggcacgctgagcccgttccatttctaccgcgacacgctcgggctgcccggcgatacgggc
tggctcgacgtcgacgggccgttccgcgccgagcaactgacggtacgcgtcgcgagccac
gtgtcgacgcgctggcgcgaccgcgaccggtcgctcgaaccgatcgccgacctgatcgcg
gcgcaatacgcgacacggcccggcaactacctcggtttcctgagcagcttcgactacctc
gggcgcgtggttgcgctgatgcagacgcgccatccggacgtgcccgtgtgggcacaggcg
cccggcatggccgaaagcgagcgcgacgcgtttctcgcgcgcttcgacgcaggcgggcga
ggcgtcggcttcgcggtgctgggcggggcgttttcggaaggtgtggacctggtcggcgaa
cggctgatcggcgccttcatcgcgacgctcgggctgccgcaggtcaacgacgtcaacgag
cagatgcggcaagcgatggaggcgcgcttcggcaacggttacgactacatgtacctgtat
ccgggcttgcagaaggtcgtgcaggctgccgggcgcgtgatccgcaccgagcatgacgaa
ggcgtcgtgcacctgatcgacgaccgttaccgaaggcgcgaagtgcgcgacctgctgccg
cgatggtggcgaatcgggtga
DBGET
integrated database retrieval system
