Bartonella sp. 1-1C: B11Cv2_013050
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Entry
B11Cv2_013050 CDS
T05463
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
baro
Bartonella sp. 1-1C
Pathway
baro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B11Cv2_013050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baro03021
]
B11Cv2_013050
03019 Messenger RNA biogenesis [BR:
baro03019
]
B11Cv2_013050
Transcription machinery [BR:
baro03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
B11Cv2_013050
Messenger RNA biogenesis [BR:
baro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B11Cv2_013050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
Spore_III_AA
DUF6360
NACHT
AAA
Motif
Other DBs
NCBI-ProteinID:
ATO58041
UniProt:
E6YXD8
LinkDB
All DBs
Position
complement(1457307..1459172)
Genome browser
AA seq
621 aa
AA seq
DB search
MQEMKLQELKSKNPVELVSFAETLEVENASLMRKQELMFAILKKLTLQNVEIIGEGVVEV
LQDGFGFLRSADANYLPGPDDIYLSPTQIQNFSLKTGDTVEGPIRGPKEGERYFALLKVN
KINFEDPEKIRYKIHFDNLTPLYSNERFQMEVQNPTDKDMSSRVIDLISPLGKGQRGLIV
APPRTGKTVLLQNIAHSITTNHQMKLQELKSKNPVELVSFAETLEVENASLMRKQELMFA
ILKKLTLQNVEIIGEGVVEVLQDGFGFLRSADANYLPGPDDIYLSPTQIQNFSLKTGDTV
EGPIRGPKEGERYFALLKVNKINFEDPEKIRYKIHFDNLTPLYSNERFQMEVQNPTDKDM
SSRVIDLISPLGKGQRGLIVAPPRTGKTVLLQNIAHSITTNHPECYLIVLLIDERPEEVT
DMQRSVKGEVVSSTFDEPAIRHVQVAEMVIEKAKRLVEYGRDVVILLDSITRLGRAYNTV
VPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKG
TGNSEIVLDRKVADKRTFPAMDIIKSGTRKEDLLVARQDLHKIFVLRRILAPMSVTDAIE
FLIDKLKQTKNNSEFFDSMNT
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaatgaaattacaagagctaaaaagtaaaaacccagttgaacttgtttctttt
gctgaaacattggaagttgaaaatgcttctttaatgcgcaaacaggaattaatgtttgct
attttaaaaaaacttaccttacaaaatgtagaaattataggcgaaggcgttgttgaagtt
ttacaagacggatttggatttcttcggtctgctgatgctaattatcttccaggaccagat
gatatttacctttcaccaacacagatacaaaacttttcattaaaaacaggagataccgtc
gagggaccaatacgaggaccaaaggaaggagagcgatattttgccctccttaaagttaat
aaaattaattttgaagatcctgaaaaaattcgttacaaaattcattttgataatcttact
cctctttattcaaatgagcgttttcaaatggaagtgcaaaatcctacggataaagatatg
tcatcacgagtaattgatttgatatctcctctaggaaaagggcaaagaggattgattgtt
gcaccaccacgaacaggaaaaacagttttattacagaatattgctcattctattacaaca
aatcatcaaatgaaattacaagagctaaaaagtaaaaacccagttgaacttgtttctttt
gctgaaacattggaagttgaaaatgcttctttaatgcgcaaacaggaattaatgtttgct
attttaaaaaaacttaccttacaaaatgtagaaattataggcgaaggcgttgttgaagtt
ttacaagacggatttggatttcttcggtctgctgatgctaattatcttccaggaccagat
gatatttacctttcaccaacacagatacaaaacttttcattaaaaacaggagataccgtc
gagggaccaatacgaggaccaaaggaaggagagcgatattttgccctccttaaagttaat
aaaattaattttgaagatcctgaaaaaattcgttacaaaattcattttgataatcttact
cctctttattcaaatgagcgttttcaaatggaagtgcaaaatcctacggataaagatatg
tcatcacgagtaattgatttgatatctcctctaggaaaagggcaaagaggattgattgtt
gcaccaccacgaacaggaaaaacagttttattacagaatattgctcattctattacaaca
aatcatcctgaatgttatcttattgttttattaatagatgaacgtccagaagaagttact
gatatgcaacgttctgtaaaaggggaagttgtttcttctacttttgatgaaccagcaata
cgccacgtacaagtcgctgaaatggttattgagaaagctaaaagattagttgaatatgga
cgtgatgttgttattcttcttgattcaattacacgtcttggacgcgcatataatactgtt
gttccttcatcaggaaaggttttaacaggtggtgtggatgcaaatgctttacaacgtcct
aagcgtttttttggtgcagctcgtaatattgaagaaggaggatctttaactattatagca
acagctttaatagatacgggaagtcgcatggatgaagttatttttgaagagtttaagggg
actggtaactcagaaattgttcttgaccgtaaagttgctgataagcgtacttttccagct
atggatattattaaatcaggaacacgtaaagaagatcttttagtagctcgtcaagattta
cataagatttttgttcttcgtcgtatattagcacctatgagtgtaacagatgctattgaa
tttttaattgataaattaaaacaaacaaaaaataatagcgaattttttgattcaatgaac
acgtaa
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