Buchnera aphidicola Tuc7 (Acyrthosiphon pisum): BUAPTUC7_290
Help
Entry
BUAPTUC7_290 CDS
T00821
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bau
Buchnera aphidicola Tuc7 (Acyrthosiphon pisum)
Pathway
bau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BUAPTUC7_290 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bau03400
]
BUAPTUC7_290 (mfd)
Enzymes [BR:
bau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BUAPTUC7_290 (mfd)
DNA repair and recombination proteins [BR:
bau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
BUAPTUC7_290 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
Helicase_C
CarD_TRCF_RID
MFD_D3
ResIII
UTP15_C
ERCC3_RAD25_C
RecG_dom3_C
dATP-dGTP_PPHyd
Motif
Other DBs
NCBI-ProteinID:
ACL30103
LinkDB
All DBs
Position
complement(323805..326243)
Genome browser
AA seq
812 aa
AA seq
DB search
MKITKNKILKNKKIINFKYQKLLDLFYNVNNQKKNNQLLSYLYSFSGKIIFSLTEEKSLK
KILRFLMRHKIHPQYIKRIIDIKKEIDYFYMIEEIKNGFIDKKNNILFLCTKDLLPILIN
DKYISNIKKNTNNINKFNLSQLILNHPVMHIEHGIGRYKGLTTIETASIQSEYLVISYAE
GDKLYVPVSNLHLVSPYTGTSIENAPLHKLGGDDWNKEKHKISKTVYDHAAQLLHIYAKR
ESKTGFAFKKNIEKYDLFCNDCSFKTTSDQNEVMKFVLKDMSKPIPMDRLICGDVGFGKT
EIAMRASFLAVSNKKQVAILVPTTLLAQQHYKNFKIRFSNWPVNINILSRFQTQKEQDLI
FKHTKNGRINIIIGTHKLLFKNIEWCSLGLLIIDEEHRFGVSHKEIIKKIYSNIDILTLT
ATPIPRTLNMAMTGIKDLSIIAKPPAQRLAIKTFIQEYSPILIRKTILREISRGGQVYYI
YNKVQNIMNIAERLSILIPEASIKIGHGQMKNIDLKKVMNEFYNNKFNVLICTTIIESGV
DIARANTIIIENSDHFGLSQLHQLRGRIGRSNNQAYALLLVNNFNKITSDAKKRLEAISS
VDNFGGGFSLSNQDLEIRGVGEILGKEQSGHIKNIGFSLYMDLLKNAIDLLKNGKIFSVE
KSLKKPLEIDLHVSSLLPSSYILDINTRLFFYKKLANAIHEKQIEEIKYELIDQFGKLPD
FSKNLILIAKIRLIADKIGIKYIKSNNNIGVIEFNDYGSINTEYLLKMFQKEPKIWKMET
STRIKFILHLKNDYLRLKWIINLLRNLFKKNI
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattacaaaaaataaaattttaaaaaacaaaaaaattattaattttaaatatcaa
aaattactagatctattttataatgtaaataatcaaaaaaaaaataatcagttattgtcc
tatttatattcattttcaggaaaaataatattttctttgacagaagaaaaatctttaaaa
aaaattttaagatttttaatgagacataaaatacacccacaatatattaaaagaattatt
gatattaagaaagaaattgattatttttacatgatagaagagatcaaaaatggatttata
gataaaaaaaataatattttatttctttgtacaaaagatttgttgccaatattaattaat
gataaatatattagtaatataaaaaagaatactaacaatattaataaatttaacttatct
caattgattttaaatcatccagttatgcatattgaacacggtattggaaggtataaagga
ttaacaactatagaaactgctagtatacaatctgaatatcttgttatttcatatgcagaa
ggggataaattatatgtaccggtttcaaatctacatcttgtctcaccttataccggaaca
tctatagaaaatgctcctcttcacaaattaggtggtgatgattggaataaagaaaaacat
aaaattagtaaaacggtttacgatcatgcagcacaattactacatatttatgcaaaaaga
gaatctaaaacaggttttgcatttaaaaaaaacatagaaaaatatgacttgttttgtaat
gactgttcttttaaaacaacatcagatcaaaatgaagtaatgaagttcgtactaaaagac
atgtctaaaccaattcctatggatcgtttaatttgtggtgatgtcggtttcggaaagact
gaaatagcgatgcgtgcttcttttttagctgtatctaataaaaaacaagtagctatttta
gtgccaactactttattagcacaacaacactataaaaatttcaaaattcgtttttctaat
tggcctgttaatattaatatattatctagatttcaaacacaaaaagaacaagatttaatt
tttaagcatactaaaaacggacgaattaatataataataggtactcataaactgctattt
aaaaatatagaatggtgtagtctcggactattaattattgatgaagaacataggtttggc
gtgagtcataaagaaattataaaaaaaatatattctaatattgatatactgactttaaca
gctacgcctatacctcgtactttaaatatggctatgactggtataaaagatctatctatt
atagcaaaacctccagctcaaagattggcaattaaaacttttattcaagaatatagtcct
atattaataagaaaaacaatactacgtgaaatatcaagaggcggtcaagtttattatata
tataataaagttcaaaatatcatgaacatcgctgaaagattatcaatattaattcccgaa
gctagtattaaaataggtcatggacaaatgaagaatatagatttaaaaaaagtcatgaat
gaattttacaacaataaattcaatgtcttgatttgtactacgattattgaaagtggtgtt
gatatagcaagagctaatacaattattattgaaaattctgatcattttggattatctcaa
ttacatcaacttcgcggacgtattggtcgatcaaataatcaagcatatgctttattactt
gtcaataattttaataaaatcacttcagatgccaaaaaaagattagaagcaatttcatca
gttgataattttggaggaggtttttctctatctaatcaagatttagaaattagaggagta
ggtgagatactaggtaaagaacaaagcggacatataaaaaatataggtttttctttatat
atggacttgttgaaaaatgctattgatttactaaaaaatggaaaaattttttctgttgaa
aaatcattaaaaaaaccattagaaattgatttacatgtatcttccctactacctagtagt
tatatattagacattaatacaagattatttttttataaaaaactcgccaacgctatacat
gaaaaacaaatagaagaaataaaatatgaactaattgatcaatttggtaaactacctgat
ttttctaagaatttaattctaattgctaaaattcgattaatagcagataaaattggtatt
aaatatattaaatctaataataacataggcgtaatagaatttaatgattatggttctata
aatactgaatatttactgaaaatgtttcaaaaagaaccaaaaatctggaaaatggaaact
tctacaagaataaaatttattttgcatttaaaaaatgattatttgcgtctcaagtggatt
attaatttattaagaaatttatttaaaaaaaatatttaa
DBGET
integrated database retrieval system
