Bartonella australis: BAnh1_06730
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Entry
BAnh1_06730 CDS
T02469
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor (superfamily II helicase)
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
baus
Bartonella australis
Pathway
baus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
baus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BAnh1_06730 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baus03400
]
BAnh1_06730 (mfd)
Enzymes [BR:
baus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAnh1_06730 (mfd)
DNA repair and recombination proteins [BR:
baus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
BAnh1_06730 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
DEAD
Helicase_C
UvrB_inter
CarD_TRCF_RID
MFD_D3
Motif
Other DBs
NCBI-ProteinID:
AGF74552
UniProt:
M1NYN1
LinkDB
All DBs
Position
complement(843571..847059)
Genome browser
AA seq
1162 aa
AA seq
DB search
MPVLKKTIASTNAHISTIFDGVTDGFEPFALAKLSSEIARDRPLVYIMRDGTKIADLQQA
LSFIEPNLPIFQFPAWDCLPYDRASPGVAVSARRISTLACMLNLCKDPRSAIILTTANAI
IQKLPPCTIASEKIIHTHVGQRVCMSDLVRYLECNGFERTTVVRDVGEFAVRGGILDIFS
PGEIEPFRLDFFGDTLETIRVFDSATQRTIANRNDFFLQPMSEVILTHQSISRFKNNYTR
VFGVPQKTDMLYEAISQGRRFAGMEHWLPFFYENLDNFFDYCGDPLVVCEHLVEEALVER
RRLIEDYYSARKERENNGESNIFYHPVEPELLYLTPKQILARTQQSGQRIDFTPFSVPDT
FGQRIIHSNVTSGYDFVKERNAQDKNVFSSVVDHIASLRTNGKKVLLACWSEGSMNRLLQ
VLGEYGLQKIEIVKSLKAAKAVPQDHILAAVIMIEHGFDTGDFAIITEQDILGDRLIRPV
RRRKRSAHFISEISALNSGDIVVHIEHGIGQFIGLKTIMTTGILRDCLEINYAGGDRLFL
PVENIELLSRYGAESADVALDKLGGVAWQARKTRLKRHLLHIAGQLIRIAAERSTHSAPS
LLPPIGAFDEFVARFPYEETEDQMDAIDAVLDDLAVGKPMDRLICGDVGFGKTEIAIRSA
FVAALNGYQVAVVVPTTLLSRQHYKTFISRFQGSPVKIGHVSRLVKAKELAQVKKDISEG
KIDIAIGTHALLSESINFSRLGLLIIDEEQHFGVKHKERLKEFKSDIHVLTLSATPIPRT
LGLALSGLRELSLITTPPIDRIAVRTFISPFDALVIRETLLREYYRGGQSFYVCPRISDL
SYVEKYLKTHVPEIKFVVAHGQMPARQLDDIMNAFYDRQYDVLLSTTIIESGLDIPTANT
LIVHHAEMFGLSALYQLRGRVGRSKQRAYALFTFPPGRVLTPSADRRLKVLQSLDTLGAG
FQLASHDMDIRGSGNFLGEEQSGHIKEVGFELYQKMFEEAVSELKDGKHSENSQWSPQIS
LGTAVMIPENFVSDLSLRIELYRRLMELDDLEEINGLGAELIDRFGPLPLEVQHLLKVVY
IKALCRKAHVEKLDAGPRGIVVQFRNNHFENSARLIEWIREQGPTVKIRSDQGIVFIQDS
PAVEQRIASAELIMMQLAEMAK
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtattaaagaaaactatcgcttcaacaaatgcccatattagtacgatctttgat
ggtgttactgacggatttgagccttttgcacttgctaaattaagttcggaaattgctcgg
gataggccgcttgtctatattatgcgcgatggaacgaaaattgctgatttacagcaagct
ttgagttttattgaacccaatttgcctatttttcaatttcctgcatgggattgtttgccc
tatgatcgtgcgtcgcctggagttgctgttagtgcacgtcggatttcaactttagcttgt
atgttaaatttgtgcaaagatccgcgttctgcgattatattgacaacggcaaatgcaatt
atccaaaaattaccaccttgtacgattgccagtgagaagattattcacacgcatgttggt
caacgagtttgtatgagcgatttggtccgttatttagagtgcaacggctttgagcgtact
actgttgtgcgtgacgttggcgaatttgctgtaagaggaggaatccttgatattttttct
cctggtgaaattgaaccttttcgtcttgatttttttggagatactctagaaacaattcgt
gtatttgattcagctacgcaacggacaatagccaatagaaatgacttttttttgcagcca
atgagtgaagttattctcactcatcagtctatcagtcggtttaaaaataattatactcgt
gtgttcggggtgcctcaaaaaactgatatgctctatgaggccatttctcaaggacgacgc
tttgctggtatggagcattggttgccgtttttttatgaaaatcttgacaatttttttgat
tattgcggcgatccacttgttgtctgtgagcacctcgttgaagaggctcttgtcgagcgc
cgtcgccttatcgaagattattatagtgcacgcaaagagcgtgaaaacaatggagaaagc
aatattttttatcatccagtagagcctgaacttctttacttaacgccgaagcaaatttta
gctcgcacgcaacaatcgggccagcgtatcgattttacgccttttagtgttccggatact
tttggacagagaattattcactcaaatgttacatcgggatatgattttgtaaaagagcgt
aacgctcaagacaaaaatgttttttcaagtgtggttgaccatattgcttcattgcgtact
aatggaaaaaaagtgctcttagcttgctggagcgaagggtctatgaatcgtttattgcag
gttcttggcgaatatggactacaaaaaatagaaattgtaaaatcgttgaaagctgcaaag
gcagtgccgcaagatcatatattagcggctgttataatgattgagcatggttttgatact
ggggattttgccattataacagaacaagatatcctcggggatcgattaataagaccagta
agacggcgtaagcgcagtgcacattttatttctgaaatttctgcattaaattctggtgat
atcgttgtgcatatcgaacatggtattgggcaatttattggtctcaaaaccatcatgaca
actggaattttgcgcgattgtcttgaaattaattatgcaggaggtgatcgattatttcta
cctgttgaaaatattgaacttttatcgcgttatggagctgaatcggcggatgtagcgttg
gataagttaggcggtgttgcttggcaagcacgtaaaacacgacttaaaagacatttattg
cacattgctggccaattaatccgcatagctgcagagcgttctacgcattctgcaccttct
ttgcttccaccaattggagcatttgatgaatttgttgcgcgttttccttatgaagaaaca
gaagatcaaatggatgcaattgacgctgttctagatgatttagcagtaggaaagccaatg
gatcgattgatatgtggtgatgttggttttggaaaaacagaaattgccatccgaagtgct
tttgttgcagcattaaatggttatcaagtcgctgttgtggtgccaacaactttgctttca
cggcaacattacaaaacctttatttcacgttttcaaggatcacctgttaagattggtcat
gtctcaagacttgtgaaagcaaaagaactggcacaagttaaaaaggatatttcagaaggt
aagatagatattgctatcggaacacatgcattacttagtgaatcaatcaatttttcgcgg
ttagggttgcttattatcgatgaagagcagcattttggtgtcaaacataaagaacgtctg
aaagagtttaaaagtgatattcacgttctcacgctttcggcaacccccataccgcgaact
ttagggctcgccttatcggggttacgagaactttcattaataaccactccgcccatcgac
agaatagctgtgcgcacttttatttcaccttttgatgcacttgttatacgcgaaacattg
cttcgcgagtattaccgtggtgggcagagtttttacgtttgtcctcgtatttctgacctt
tcctacgtggagaaatatctgaaaactcatgtacccgaaattaagtttgttgtagctcat
gggcaaatgccggctagacagctggacgatattatgaatgcattttatgacagacaatat
gatgtactgctttctacaactattattgaatcaggtcttgatattccgacagctaataca
ttaattgtgcaccatgccgaaatgttcggtctttccgcactttaccagttacgtggcagg
gtggggcgctcgaagcaacgcgcttacgcgctctttacttttcctcctggtagagtctta
acaccttctgccgatcgccgtctcaaagttttacaatctctcgacactttgggagccggt
tttcaattagctagtcacgatatggatattcgcggttcaggcaattttctaggtgaagag
cagtcagggcatatcaaggaagtaggatttgagctgtatcaaaaaatgtttgaagaggcg
gtctccgagctaaaagatggtaaacatagtgaaaatagccagtggtcaccccaaatttca
cttggtacagcagtgatgataccagaaaattttgtatccgatttatcattgcgtatagag
ctttatcgtcgtttaatggagctggatgatttagaagaaattaatgggctgggagctgaa
ttaatcgatcgttttggtcctctcccgcttgaagttcagcatctcctcaaagtcgtctat
attaaagcattatgccggaaagcacatgtagaaaaattagacgcaggtccaaggggaatt
gttgtgcagtttcgcaataatcattttgagaatagcgcccgccttattgaatggatcaga
gagcaaggcccaacagtaaaaattagatcagatcagggtattgtttttattcaagattcc
ccagcagtagaacaaagaatcgccagcgcggaacttattatgatgcagcttgcagaaatg
gcaaagtaa
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