Microvenator marinus: FRD01_03355
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Entry
FRD01_03355 CDS
T08125
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bbae
Microvenator marinus
Brite
KEGG Orthology (KO) [BR:
bbae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbae03019
]
FRD01_03355
Messenger RNA biogenesis [BR:
bbae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FRD01_03355
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GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QED26307
UniProt:
A0A5B8XMG3
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Position
789901..791037
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AA seq
378 aa
AA seq
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MDHYPENRYASRFNIGVLGVKKRLFVTDINLPGHVQTIFLLMGWRRKISRDQQPYLELQL
ADRTGQIKARVWRDTELIQERLTSNFVAIRGEAEPFKDSLVITIHDLEAIDPQSIEQADF
FEASRWKAESLLAQIEDLIANEIKSEWIRSVLSFILEDQDLRAKLLAAPAAKKNHHAYRA
GLLEHALSMSRLALRICEHYAAYYPGLLNSDLVVAGCLLHDLAKVEELSFAGPTEYSTRG
KLVGHIAMGTMWLETAAKEMSPAPPADLITELQHLVLSHHGRLEYGSPILPQTAEAYLLH
QIDMIDSRLNRLFDVMPKEPHADEIWSDWDRSLGGSFHFRGENSRSWDLPHAELDLEGPG
KSRDNEPGQTMDLFGEKK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggatcattatccagaaaatcgctacgcttcacgctttaacataggggtgcttggcgtg
aaaaagcgattattcgtgactgatattaacttacccggtcacgtccaaactatattcctt
ctgatggggtggcgtcgaaaaattagtcgcgaccagcaaccttatctcgaacttcaactc
gccgaccgaaccggtcagatcaaagcgagagtctggcgagacactgagctcatccaggag
cgcctcacgtccaattttgttgccattcgaggggaagccgaaccttttaaggattccctc
gtcatcacgattcatgacctcgaagcgatcgatcctcagtctatcgagcaagccgacttc
tttgaggcgtctagatggaaggcagaatcactactcgcacaaatcgaagacctgatcgca
aacgagatcaagagtgagtggatacgctccgtcttgagttttatcctcgaagatcaagac
ttgagggcgaaactcttggccgcgccagccgcgaagaagaatcaccatgcctatcgcgcg
ggtctactagagcacgcgctttccatgtcacgactcgccctgagaatttgtgaacattat
gccgcctactatcccggactgctcaattccgatttagtggtggccgggtgcctactgcat
gatttggccaaagtcgaagaactgagctttgccggcccaaccgagtactccacgagaggg
aagctcgtcggacacattgcgatggggaccatgtggttggaaaccgcggcaaaagagatg
tcacctgcacctccggccgatctcattacagaacttcagcacctcgttctctcgcatcac
ggacgcctcgaatatggctccccaatccttccccaaaccgcggaagcctacctcttgcac
caaatcgacatgatcgacagtcgcctgaatcgactcttcgacgtgatgcccaaagagcct
catgcagacgaaatttggagcgattgggaccgttcacttggtggctcgttccacttcaga
ggcgaaaactcccggagttgggatttaccgcacgcggaactcgaccttgaagggccgggc
aaatcgcgagataacgaacctggtcaaacgatggacctcttcggagaaaagaaatga
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