Bdellovibrio bacteriovorus Tiberius: Bdt_0543
Help
Entry
Bdt_0543 CDS
T02356
Name
(GenBank) putative periplasmic protein
KO
K21470
L,D-transpeptidase YcbB
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bbat01002
]
Bdt_0543
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bbat01011
]
Bdt_0543
Peptidases and inhibitors [BR:
bbat01002
]
Cysteine peptidases
Family C82
Bdt_0543
Peptidoglycan biosynthesis and degradation proteins [BR:
bbat01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Bdt_0543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AFY00251
UniProt:
K7YKI8
LinkDB
All DBs
Position
551421..552920
Genome browser
AA seq
499 aa
AA seq
DB search
MGFLTVLSLALSANAQNSKDYLVVVDRIPVSELRWVMTQSGDHGVNAKSYWSDSMEQTFL
VDPLNPALRNQASINYLRLLQNVSTGIVDPALVGVDVKLTKKKFPTPVELQTALAAAGQN
PNVLLESMSSQMPQYLALRDSLRKMNNACVNNLWPALPKVKKTLKLGGKDPIVIPLKIRI
AQLGYPMASFDNVYDEQMVAAVNDIQWNLRFKPDSKISPGGKTWKYLNVSCQDRMRQIRL
DMEKLRWFPQYVEERYIFVNLAMSYFSLVDKSGGGFYSMSFRTINGRPERKSPTMKDKIV
YIVINPFWVVPPTIFREDKVEEIKNLWPWEIRQYFDSRHYQVWNKSFTQRIDPATIDWYN
MDPTQDANIYIRQSPHRMNALGSLKFMMTNSYAIYLHDTNQRELFAEPHRLLSSGCVRVE
KPVDLAEYLMKGTEWDRAAIERYMAKPGEVLDKDTKVQLKQQIPVYMVFLTSQLSSDGIL
RFAEDSYRQGTRLLRLGAW
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcttgactgttctgagccttgctttgagtgcgaacgcgcagaattcaaaggac
tacttggtcgttgtggacagaattccggtaagtgaactgcgctgggtgatgacacagtca
ggggatcacggagtcaatgcgaagagctactggtcggattcaatggagcaaacttttttg
gtggatccgttaaatcccgctttgcgaaatcaggcgagtattaattatttgcgcctgttg
cagaatgtttccaccggcatcgtcgatccggcactggtgggcgtggatgtgaaactgacc
aagaaaaaattcccgacacctgttgagctgcagacagctttggctgccgccgggcaaaac
cccaacgtcctgttggagtccatgtcttcacaaatgccccagtatctggcattgcgtgac
agccttcgcaaaatgaacaatgcctgcgtgaataatctttggcccgcactgcccaaagtt
aaaaaaactttgaagctgggtggcaaagacccgattgtgattccactaaagatccgtatc
gctcaactgggctatcctatggccagctttgacaacgtttatgatgagcagatggtggct
gcggtgaatgatattcagtggaacctgcggtttaaacccgacagcaagatttctccggga
ggaaaaacctggaaatatctgaatgtgtcctgtcaggaccgtatgcgacagatccgcctg
gatatggaaaagctgcgctggttccctcaatacgtggaagaacgctatatctttgtgaac
ctggcgatgtcctatttcagtctggtcgataaaagcggcggaggtttctattcgatgagc
ttccgcaccatcaacggccggcctgaaagaaaatcaccgaccatgaaagacaaaatcgtt
tacattgtgatcaacccattctgggtggtgccaccgacgatcttccgcgaagacaaggtt
gaagagatcaagaacctgtggccatgggaaattcgtcaatactttgattcccgccattat
caggtctggaacaagtcattcacccaaagaatcgatccggccactattgactggtacaat
atggatcccactcaggatgccaatatttatatccgtcaaagcccgcaccgcatgaatgcg
ctgggttcactgaaattcatgatgaccaattcctatgcgatctatctgcatgatacgaat
cagcgggaattgtttgccgagcctcatcgactgcttagttccggttgtgtgcgggtggaa
aaacccgtggatctggcagaatacctgatgaagggaaccgagtgggaccgtgccgcgatc
gaacgctatatggcaaaaccgggggaagtgctggataaagacaccaaggttcaactgaaa
cagcagataccggtctatatggtgttcctgacatcgcagctgagttctgatggaattctg
cgctttgccgaggactcttacagacagggcacccgtttgttaagactgggtgcctggtag
DBGET
integrated database retrieval system
