KEGG   Branchiostoma belcheri (Belcher's lancelet): 109461724
Entry
109461724         CDS       T07532                                 
Name
(RefSeq) DNA ligase 1-like isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bbel  Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03030  DNA replication
bbel03410  Base excision repair
bbel03420  Nucleotide excision repair
bbel03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bbel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109461724
   03410 Base excision repair
    109461724
   03420 Nucleotide excision repair
    109461724
   03430 Mismatch repair
    109461724
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bbel03032]
    109461724
   03400 DNA repair and recombination proteins [BR:bbel03400]
    109461724
Enzymes [BR:bbel01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     109461724
    6.5.1.6  DNA ligase (ATP or NAD+)
     109461724
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     109461724
DNA replication proteins [BR:bbel03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    109461724
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     109461724
DNA repair and recombination proteins [BR:bbel03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     109461724
   NER (nucleotide excision repair)
    Other NER factors
     109461724
   MMR (mismatch excision repair)
    Other MMR factors
     109461724
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C PGM1_C
Other DBs
NCBI-GeneID: 109461724
NCBI-ProteinID: XP_019613675
UniProt: A0A6P4XB40
LinkDB
Position
Unknown
AA seq 1051 aa
MLKHGLEELPKHCKLTPGTPLKPMLAHPTKGVSEVLRRFEGAEFTCEYKYDGERAQIHML
ENGEIHIYSRNQENNTSKYPDIIARMPKVKHDDVTSCIIDSEAVAWDPENKKILPFQVLS
TRKRKDADKAPKVVEKVKDESDEVPSPKMPRVTYNGPNLQSPGGIPKRKTARKQLPTPKR
KLIETKSPTSNGHTSPTAGEEESSAKKVKTEQKEETEEKTEEKMDETPDKEVKKELKDDE
SVQQNKKKSPKQKKEKQSPKSAEKKKKVKEEPEEEEKETAGPSEDSMDSLFAAVIRKAGE
ATAEKKMEESEESKEKSTKSLKSPSDKKAVKKEEDSSKKTSAGIGSFFSPKRPATSSQAS
DESSEKKASPKPAAKPMSAFFKPKQEADKTAGQSGLTAEDYNPTKAHYDPVEDACWAKDK
RVPYLALAKTFEAIEEVRARLKIMEILCNFFRSVIALTPDDLVQCVYLCLNKVGPAYEGL
ELGIGETVLMKAIAEATGRKMAQIKTDAQEKGDLGIVAETSRSTQRTMFAPPKLTVRGVF
NKLKEISTIKGNDVMTKKINFIKGMFVACRQSEARYLIRSLGGKLRIGLAEQSVLTALAH
AATLTPAGKDVLDAGKGKSSEGLKKMLEDAALILKTTYCEMPNYDAVISAMLKHGLEELP
KHCKLTPGTPLKPMLAHPTKGVSEVLRRFEGAEFTCEYKYDGERAQIHMLENGEIHIYSR
NQENNTSKYPDIIARMPKVKHDDVTSCIIDSEAVAWDPENKKILPFQVLSTRKRKDADKS
EIKVQVCVYAFDLLYLNGQSLVREPFRKRREMLRESFDEVEGEFVFATLMVSGNTEEIAE
FLDASIKDSCEGLMVKTLDKDATYEIAKRSHNWLKLKKDYLEGVGDTLDVVPIGGFLGTG
KRTGKYGGFLLACYSEEDEEFQSICKIGTGFKDEELEQHTEFFKNHVVDKPKSYYRYDSS
VEPDHWFDAVQVWEIKCADLSISPVHKAAEGIVDPEKGISLRFPRFLRIRDDKKPEEATS
AQQVAEMYSNQDQVKNQQSNEKSEAADDDFY
NT seq 3156 nt   +upstreamnt  +downstreamnt
atgctgaagcacggtttggaagagctgcccaaacactgcaagctgacacctggcaccccc
ctcaagcccatgttggcgcatcccaccaagggagtgagcgaggtgttgcgcaggttcgag
ggggcagagttcacctgcgagtacaagtacgacggggagagggcacagatccacatgcta
gaaaatggagagatccacatctatagcagaaaccaggaaaacaacacctccaagtaccca
gacatcattgcacgcatgccaaaggtcaagcatgatgatgtcacttcctgtatcattgac
tcggaggcggtagcctgggaccccgagaacaagaagatcctgcccttccaggtgctcagt
accaggaagaggaaggatgctgacaaggcccccaaggttgtggagaaggtgaaagatgag
agtgacgaggttccgtctcccaagatgccgagggtcacgtacaacggaccaaacctccag
tctcctgggggcatccccaagaggaagactgctcgcaagcaacttcccactccgaaacgt
aaactcattgagacaaagagtccgacatctaacgggcacacatcacccactgcgggtgaa
gaggagtcaagtgccaagaaagtgaagacagagcaaaaggaagagacggaagaaaaaaca
gaagaaaagatggatgaaacccctgataaagaagtgaaaaaagaacttaaggatgacgaa
agtgtccagcaaaacaagaagaaaagtccaaagcagaagaaagagaagcaaagtccaaag
tctgctgagaagaagaagaaggtaaaggaggagccagaggaggaagaaaaggagacagct
ggtccttctgaagactccatggattctctgtttgctgctgtaatcaggaaggcaggagaa
gcaacagctgaaaaaaagatggaggaatctgaggaaagcaaagaaaagagcactaaatcc
ttaaagtcaccatctgacaagaaagcagtgaagaaggaggaagacagcagcaagaaaacc
agcgcaggaatcggctccttcttctccccaaagagacctgccacctcctcccaggcttct
gatgaatcgagtgagaagaaagcctcccctaaacctgctgccaagccgatgtctgcattc
ttcaagcctaaacaggaggctgacaaaactgctggccagtctggactgacagctgaggac
tacaaccccaccaaggcccactatgaccctgtggaagatgcctgttgggctaaggataag
agggttccataccttgccttggccaagacatttgaggccattgaagaagttcgagccagg
ttgaagattatggagatcctctgtaacttcttccgttcggtgatcgcattgaccccggat
gaccttgtgcagtgcgtgtacctgtgcctgaacaaggtcgggcctgcgtacgagggtctg
gagctggggatcggggagaccgtgctcatgaaggccatcgccgaggccaccgggaggaag
atggctcagatcaaaactgacgctcaggagaagggtgacctgggaatagtggctgagacc
agtcgcagcacacagcgcaccatgtttgctccacccaagctgacagttaggggagtcttc
aacaagctgaaggaaatttccaccatcaagggcaatgatgtcatgacgaagaagataaac
ttcatcaagggcatgtttgtagcgtgtcgtcagtccgaggcgcggtaccttatccggtcg
ctagggggcaagttgaggattgggctggcagagcagtctgttctgaccgcactggcccat
gcagcaactctcactccagctgggaaagatgtacttgatgcagggaagggcaagtcctca
gaaggactgaagaagatgttggaagatgctgcactcatcctcaagactacctactgtgag
atgccgaactacgacgctgtcatctctgccatgctgaagcacggtttggaagagctgccc
aaacactgcaagctgacacctggcacccccctcaagcccatgttggcgcatcccaccaag
ggagtgagcgaggtgttgcgcaggttcgagggggcagagttcacgtgcgagtacaagtac
gatggggagagggcacagatccacatgctagaaaatggagagatccacatctacagcaga
aaccaggaaaacaacacctccaagtacccagacatcattgcacgcatgccaaaggtcaag
catgatgatgtcacttcctgtatcattgactcggaggcggtagcctgggaccccgagaac
aagaagatcctgcccttccaggtgctcagtaccaggaagaggaaggatgctgacaagtca
gagattaaggtgcaggtgtgtgtgtatgccttcgacctgctgtacctcaatggacagtcc
cttgtacgagagccgttccgcaaacgtcgcgagatgctgcgagagtcgtttgacgaggtg
gagggagagtttgtgttcgccacattgatggtgtcgggaaacacggaggagatcgcagaa
ttcctagacgcctccatcaaagacagctgtgagggcctgatggtcaagactcttgacaag
gatgccacctatgagatagccaagagatcacataactggctcaagttgaagaaggattac
ctggagggtgtgggagacacgctggacgttgtgcccatcggaggcttcctgggcacaggg
aagaggacagggaagtacggaggcttcctattggcctgctacagcgaagaggacgaagaa
ttccagtctatctgcaagattggtacgggttttaaggatgaagaactggagcaacataca
gagttcttcaagaaccatgttgttgacaagcccaagtcgtactatcgctatgacagcagt
gttgagccggaccactggtttgatgcagttcaggtgtgggagatcaagtgtgccgatctg
tccatctctcctgtgcacaaggctgctgagggcatcgttgacccagagaaagggatctcc
ctacgtttcccacgattcctgcgtatccgtgatgacaagaagcctgaagaggcaaccagt
gcacagcaggttgcagagatgtacagtaaccaggaccaggtgaagaaccaacagtcgaac
gagaaatctgaagcagcagatgacgacttctactga

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