Branchiostoma belcheri (Belcher's lancelet): 109465247
Help
Entry
109465247 CDS
T07532
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
109465247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbel03400
]
109465247
Enzymes [BR:
bbel01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
109465247
DNA repair and recombination proteins [BR:
bbel03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
109465247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT_2
BRCT
DNA_ligase_IV
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
109465247
NCBI-ProteinID:
XP_019617970
UniProt:
A0A6P4XMV2
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
MAVAATVPFTHLCTMLEGVDRAKGKDNKKKVFKEFLDKWREFHNSVHKDDPNTEDSFYPA
MRLILPQCERERIAYGIKEFTLAKYYIEILGLAKDSPDALKLLKYRAPSHAKGEAGDFAA
VAYFVLKNRCPEKGSLTIQEVNDLLDSIATNNAAKNKEEVRRSILKLLRSTSAMEQKWLI
RMIMKELKMGMNQAGVFAVFHPDAEDLFNVTNSLAKVCTDLRDPHVRLNEIAISLFSPFK
PMLGQRIPLDGVEKEMHHEMFYIETKFDGERMLLHKDGDTYKYFSRSGKDYTHQFGAHPL
EGSLTPYIHNSFASHVKSCILDGEMVGYNPQTKSIMSKGDKFDIKNMAEDSDLQTMYCVF
DILLLNGQKFANSPLRERVDYLDKLFTPIEGRLFLGDRKEARTKAEVIDALNEAIDRREE
GLVIKYPGSKYAPDKRKGSGWLKVKPEYVDGLMDQVDVVIVGGYFGKGRRSHMISHFLCA
VAVQSTTPGEKPALFHTFCRVGSGYTLKELYQMGQKLHPHWRVFDKKKPPKTNIMFPSGY
KEAPDVWIDPEQSLIVQIKAAEIIESDKFKTGCTLRFPRLEKVRDDKEWFDCMTLEELDD
MRKNAEGKLASRHAGIDDSGEPAKKKRRTVVRVEKPITVAPQFKAADTSKVQQVSTIFED
REFCIINGPPEHGKADLEKKVVAYGGTVVQAPGPDTACVLAHKVNVRVNNIISGGKYDVV
KAEWLLRCWEEKRSVPWLPSHMIHMSPDTAARFALQFDRHGDSFTDDATVNSMKEVFEKI
GEEKSSSKVTSMDIAEMEEKYFPNESPLGLFRLCRLYVDNCHVIGDQSTRMKDCPLDLVA
LEVRFHGATVSPILDSDVSHVLFHNSDLSRLDEVKALRRQRTKKHHLVTPEWVSDCLQAG
AILTERDYEPDITKDST
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggcagctacagtacccttcacccacctctgtaccatgctggagggggtggac
agggcaaagggcaaggacaacaagaagaaagtcttcaaggagttccttgacaagtggaga
gagtttcacaactctgtgcacaaggatgatccaaacactgaggattccttctacccagcc
atgagactcatcctaccacagtgtgagagggagaggatcgcttatggcatcaaagagttt
acccttgcaaagtactacatcgagatcctgggtttggccaaagacagcccagatgcactg
aaactgctgaagtacagggcaccttcacatgctaaaggggaagcgggtgattttgcagct
gttgcctactttgtcctgaagaacaggtgtccagagaagggcagtttgacaattcaggag
gtcaatgacctgttggactccatcgcgacaaacaatgcagccaagaacaaggaggaagtg
agaaggagcatcctgaaactactcaggagtacctcagccatggaacagaaatggctgata
aggatgataatgaaggagttgaagatgggaatgaaccaggctggagtgtttgcagttttc
caccctgatgcagaggacttgttcaacgtcaccaacagtctggccaaggtgtgtactgac
ctgagagatccccatgtgcggctgaatgagattgccatcagtctgttctcaccattcaaa
cctatgctgggacagaggataccactggatggggtagaaaaggagatgcaccatgagatg
ttctacatagagaccaagtttgatggtgagaggatgttgttacacaaggatggagacact
tacaagtacttctccagatctgggaaagactacactcatcagtttggtgcccacccactg
gaaggcagtctcactccatacatacataattcttttgccagtcacgtgaagtcctgtatc
ctggatggagaaatggtgggctacaacccacaaactaagtccatcatgtctaaaggagat
aaatttgacataaaaaatatggcagaagacagtgacttacagaccatgtactgtgtgttt
gacatcctactgctgaatggacagaagtttgccaacagtcctcttcgagaaagggtggac
tatcttgacaaactgttcacaccaattgagggccgtttatttctgggagacaggaaggag
gcaagaacaaaggctgaggtaattgatgccttgaatgaagccattgacaggagagaagaa
ggactggtcatcaagtacccagggtccaagtacgctccagacaagagaaagggaagtggt
tggttgaaggtgaagcctgagtatgtggatggactgatggaccaggtagatgttgtgatt
gtaggtggctactttggtaaagggcgtcgcagtcacatgatctcccacttcctgtgtgcg
gttgctgtccagtcgaccactccgggagagaagcctgcactcttccacactttctgtagg
gttggatcaggttacacactgaaggaactgtaccagatggggcagaagctccacccacat
tggagggtctttgacaagaagaagccacccaaaaccaacatcatgtttccctctggttac
aaggaagcccctgatgtgtggattgatccagaacagtcacttattgttcagatcaaagct
gcagagatcattgagagtgacaaatttaagacaggatgtactctacgtttcccacgtctg
gagaaagtgcgggatgacaaggagtggtttgactgtatgaccctggaggaactggatgac
atgagaaagaatgcggaggggaagcttgcctccaggcatgctgggatagatgacagcggt
gagccggctaagaagaagcgtcggacggtggttcgtgtggagaagccgatcacggtcgct
ccgcagttcaaggcagcagacacttccaaagtgcagcaggtttctaccatatttgaagac
agagagttctgtatcatcaacggtcctcccgagcatgggaaggcagacctggagaagaag
gtggtggcgtacggaggcacggtcgtccaggctccgggacctgacactgcctgtgtgctc
gctcataaggtcaatgtcagggtcaacaacatcataagtggtggcaagtatgatgttgtc
aaggcggaatggcttctgagatgttgggaggagaagcggagtgttccctggctgccctcc
cacatgatccacatgtcccctgacaccgccgcacggttcgctctgcagtttgatcgccat
ggagacagcttcactgatgacgcaactgtgaacagtatgaaggaggtctttgaaaagatc
ggggaagagaaatcaagctccaaggtcaccagcatggacattgcagaaatggaggaaaag
tatttccctaatgaatcacccttggggctattcaggctctgtaggctgtatgtggacaac
tgtcatgtcatcggggaccagtctactaggatgaaagactgtccgttggacctggtagct
ctggaggttcgttttcatggagcaacagtcagccctatcctggacagtgatgttagtcat
gtgctgttccacaacagtgacttgagcagactggatgaagtgaaggccttaagaagacag
aggacaaagaagcaccatcttgtgacaccagagtgggttagtgactgtcttcaggctgga
gctatcctgacagagagggactacgaacctgacatcactaaagactcaacgtaa
DBGET
integrated database retrieval system
