Branchiostoma belcheri (Belcher's lancelet): 109480156
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Entry
109480156 CDS
T07532
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03022
Basal transcription factors
bbel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109480156
09124 Replication and repair
03420 Nucleotide excision repair
109480156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbel03021
]
109480156
03400 DNA repair and recombination proteins [BR:
bbel03400
]
109480156
Transcription machinery [BR:
bbel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109480156
DNA repair and recombination proteins [BR:
bbel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109480156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Motif
Other DBs
NCBI-GeneID:
109480156
NCBI-ProteinID:
XP_019637874
UniProt:
A0A6P4ZV05
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MCRLETKMADEEVEKTYRWEGDYEKTWEVLQEDAAGSLQASVDDIIHRAKRRRLQDRQLN
VRLGMMRHLFVVVDMSQSMEDQDLKPTRILVTLKLLENFIEEYFDQNPISQLGIITTKNK
RAEKLTDLGGNPKRHITQLKTLANTSCVGEPSIMNSLDLAAQTLKHMPTHTSREVLIIMG
SLTTCDPGDINITIKMVKDLNIRCSVIGLAAEVQVCKKLCSTTNGTYSIILEDTHFKDLL
LEHCTPPPATVNTDSSLIKMGFPQHTVSQDHDSVKPSMCMCHQDTEAQSFTPSGYFCPQC
HAKYCELPVECKICGLTLVSAPHLARSYHHFFPLENFREIPLEELDSELSRFCTGCQVQL
KGPMVYCCTRCTRPFCIDCDLFIHETLHSCPGCINKRIGPNSS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagattagaaaccaagatggcggacgaagaagtcgagaaaacgtaccggtgggag
ggagattatgagaaaacttgggaggtactgcaggaggatgcggcaggttcactccaggcc
agtgtggatgacatcatccatagggccaagaggaggagactgcaggatagacagctcaat
gttcgactggggatgatgagacacctgtttgtggttgtggacatgtcacagtctatggaa
gaccaagacctcaaaccaacaagaatcctggttacccttaagttactggagaatttcata
gaggaatatttcgaccagaatcccattagtcagttaggcatcatcacgactaagaacaag
agggcagagaagctgacagacctgggagggaaccccaaacgtcacatcacccagctgaag
acactagccaacacctcgtgtgtcggggaaccctccatcatgaactcactggacctagca
gcacagacactcaaacacatgccgacccacaccagtagggaggtgctgatcatcatgggc
agtctcaccacatgtgaccctggggatatcaatatcaccatcaagatggtgaaagacttg
aacatcaggtgctcagtgattggcctggcagctgaggttcaagtttgcaagaaactgtgc
agtacaacaaatggaacctacagcattattttagaagacacacactttaaggacttgtta
ctggaacactgcacccctccccctgctactgtcaacacagattcctcattgataaaaatg
ggtttccctcagcatactgtaagtcaggaccatgatagtgtcaaaccatctatgtgtatg
tgccaccaggatacagaagcccagtccttcactccatctggatatttctgtccacagtgc
catgccaagtactgtgagctacctgtggagtgtaaaatctgtgggttgactctagtctca
gccccacacctggcacggtcctaccatcacttcttccccctggaaaacttccgggaaatt
cctttagaagaactcgactcagaactttccagattttgtacggggtgccaggtacagctg
aagggacctatggtgtactgttgtaccaggtgcacacggccattctgtatcgactgtgat
ctcttcatccacgaaactctccactcctgtcctggctgtattaacaagaggatagggccc
aactcatcatag
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