Bifidobacterium bifidum S17: BBIF_0578
Help
Entry
BBIF_0578 CDS
T01328
Symbol
murD1
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bbi
Bifidobacterium bifidum S17
Pathway
bbi00470
D-Amino acid metabolism
bbi00550
Peptidoglycan biosynthesis
bbi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BBIF_0578 (murD1)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BBIF_0578 (murD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bbi01011
]
BBIF_0578 (murD1)
Enzymes [BR:
bbi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BBIF_0578 (murD1)
Peptidoglycan biosynthesis and degradation proteins [BR:
bbi01011
]
Precursor biosynthesis
Amino acid ligase
BBIF_0578 (murD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
ADO52783
LinkDB
All DBs
Position
708474..709904
Genome browser
AA seq
476 aa
AA seq
DB search
MDLSDKTVLVAGLGISGRSMMEVLRSRAARVIGVDEHNPEADLHSFDGIDWDSADIVMTS
PVFNPRTPFILEAQRRGIPVYSEVELAWRLRVDSARTGRPAPWVGITGTNGKTSTTEMTS
AMLCANGLVAPAVGNIGKAVSHAAVDPDNDALCVELSSFQLHFTDSLALDCAAITNIADD
HLDWHGGIEAYAADKSKVFRNVRRALVFNADDRRVSALASAAHTAEGCRRIGFTLGVPQP
GQIGVDDGWIVDRSGVAGGAFGDETRLAPVQEFPHLCEPDGTVYPHLLADAMTALALALG
MGVDLDKALAALKAFAPGGHRIQTVATAATGDGGSIRFIDDSKATNAHAARASLSSFAPK
SVVWIAGGLAKGSRFEQLVADQAHTIKAAVIIGKDQKPMLEAFAASAPDIPLTVIEPEPS
DTVMARAVDAAGAYAGTGDVVLMAPACASMDQFVSYADRGTQFARESSRWVTQHGK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggatctcagtgacaagaccgttctggtggccggtctgggtatatccggccgcagcatg
atggaagtgctgcgctcccgcgcagcgcgggtaatcggcgtggacgagcataatccggag
gccgacctgcattcgttcgacggcatcgactgggattcggccgacatcgtcatgacgtcg
ccggtgttcaacccgcgcacgccgttcatcctcgaagcccaacgccgaggcatccccgtg
tacagcgaggtcgagctcgcgtggcggctgcgcgtggacagcgcccgcaccggccgcccc
gccccgtgggtgggcatcaccggcacgaacggcaagacgtccacgaccgagatgacctcg
gccatgctgtgcgccaatggcctcgttgcaccggcggtcggcaacatcggcaaggcggtg
tcccacgccgcggtcgatccggacaacgacgcgctgtgcgtggagctcagctcgttccag
ctgcatttcaccgattcgctggcgctggattgcgcggcgatcacgaacatcgccgacgac
catctcgactggcatggcggcatcgaagcgtacgccgccgacaagtcgaaggtgtttcgc
aacgtcaggcgcgccctggtgttcaacgccgacgaccggcgcgtcagcgcgctcgcctcg
gcggcgcataccgccgagggatgccggcgcatcggattcacactcggcgttccccagccc
ggccagatcggcgtggacgacggctggatcgtcgaccgcagtggcgtggccggcggcgca
ttcggcgatgagacccgcctggcgccggtccaggagttcccccacctgtgtgagccggac
ggcaccgtgtacccgcacctgctcgccgacgcgatgaccgcgctggcgttggcgctggga
atgggcgtggacctcgataaggcgttggccgcgctgaaggcgttcgcccccggcggccat
cgcatccagaccgtggcgacggcggcgacgggcgacggcggctcgatacgcttcatcgac
gattcgaaggcgacgaacgcccacgcggcgcgggcgtcgctgagcagcttcgcccccaag
agcgtggtgtggatcgccggaggactcgccaagggaagccgtttcgaacagctcgtggcg
gatcaggcgcatacgattaaggcggccgtcatcatcggcaaggaccagaagccgatgctt
gaggcgttcgccgccagcgcacccgacattcctcttaccgtgatcgagcccgagccctcg
gacacggtgatggcgcgcgcggtcgatgccgcaggcgcatacgccggcacaggtgacgtg
gtgctgatggcacccgcctgcgcctccatggaccagttcgtctcctacgcggaccgcggc
acccagttcgcgcgggagtcctcacgatgggtgacgcagcatggcaagtga
DBGET
integrated database retrieval system
