Bombus bifarius (two-form bumblebee): 117206160 Help Entry 117206160         CDS       T07537                                  Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism bbif  Bombus bifarius (two-form bumblebee) Pathway bbif03030   DNA replication bbif03410   Base excision repair bbif03420   Nucleotide excision repair bbif03430   Mismatch repair Brite KEGG Orthology (KO) [BR:bbif00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     117206160    03410 Base excision repair     117206160    03420 Nucleotide excision repair     117206160    03430 Mismatch repair     117206160  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:bbif03032]     117206160    03400 DNA repair and recombination proteins [BR:bbif03400]     117206160 Enzymes [BR:bbif01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      117206160     6.5.1.6  DNA ligase (ATP or NAD+)      117206160     6.5.1.7  DNA ligase (ATP, ADP or GTP)      117206160 DNA replication proteins [BR:bbif03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     117206160  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      117206160 DNA repair and recombination proteins [BR:bbif03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      117206160    NER (nucleotide excision repair)     Other NER factors      117206160    MMR (mismatch excision repair)     Other MMR factors      117206160 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  117206160 NCBI-ProteinID:  XP_033301146 UniProt:  A0A6P8LKY9 LinkDB All DBs Position Unknown AA seq 954 aa AA seqDB search MYTRIAFNLRSIVFNNIYSRPVIFLSKQFQLNNAFSPIVNNVLNRILANSKIVKNGDQSN SGNPKRKRDDSGDSSETASPPIGNSSRKKSVSKSPLPLKKENGTPKIKLSPIATTKEKEK RKSKTPHTATKKKRKTNEVKSTPKKSDAKKKLKDVSSDEDQKENELTVEKKTETSDEFES SKSSPKESKTKKNVKSSEKKATKKRSRIIAPVDSSDEEEHNLLPESPKKANLDVEENNPV NEEENSDEDVLDNQKDSEEEEKKKEANVEKPAKKIHNFFAPKKKESTNNTDKDKKKSSSH SYKPSASKYDPINDAFWKQGEKVPYIALTRTLELIEDTSARLKIIEILSNYFRSVIVLSP DDLLPSIYLCLNQLAPAYEGIELGVAETNLMKAIAQCTGRTLAQIKADVQTVGDLGIVAE GSRSNQRTMFQPAPLTVSIVYTRLKEIAQMTGSASLTKKLDKIQSLFVACRFTEARYLIR SLAGKLRIGLAEQSVLQALALACTMTPPIQSYPPEVLDVSKKMSSDAFKQKYDETALTLK TTYCECPNYDKIIPVLLKEGIEELPNKCKITPGIPMKPMLAHPTKGVQEVLTRFDGLKFT CEWKYDGERAQIHLAEDGKISIYSRNQENNTSKYPDIIGRFKNTQGEEVKSCILDCEAVA WDNENKQILPFQILSTRKRKDANEADIKVQVCVFMFDLLYLNGEPLVQQPFIKRRELLKK NFKEVIGEWKFATSLDTSTMEQVQDFLDESVKGNCEGLMVKTLEQDATYEIAKRSRNWLK LKKDYLEGVGDTLDVVVIGGYIGKGKRTGTYGGFLLACYDQENEEYQSVCKIGTGFSEED LQKHTEFFKEHIIPQTKSYYRYDSSLEPDHWFEPVQVWEIKCADLSLSPVHKAAVGIIDP EKGISLRFPRFVRIRDDKNNEDATSAQQVANMYNSQEQIKNQTSSTKVAEEDFY NT seq 2865 nt NT seq  +upstreamnt  +downstreamnt atgtatactcgtattgcgttcaatttgagatcaattgtattcaataatatttattcgcga cctgtgatatttttaagtaaacaattccaattgaataatgctttttcccctattgtaaat aatgttcttaatcggatactcgctaatagcaaaattgtaaagaatggagaccaaagcaat tcgggtaaccctaaacgaaaaagagacgatagtggagatagcagtgaaactgccagtcca cctattggaaattcctcaaggaagaaatcagtctcaaaatctccgttaccactaaagaaa gaaaatggaacaccaaaaattaagctatcaccaatagcaacaactaaggaaaaggaaaaa agaaaaagtaaaactccacatactgctactaaaaagaaaagaaaaaccaatgaagtaaaa agtacccctaagaagagcgatgcaaagaagaaattgaaagatgtgtcaagtgatgaggac cagaaagaaaatgagttgactgtagaaaagaaaacagaaacaagtgatgaatttgaatct tcaaagtcttcgcctaaggaatctaaaactaaaaagaatgttaaaagtagtgaaaaaaaa gctactaaaaaaaggtcaaggataatagcacctgttgattccagtgacgaagaagaacat aatctgttgccagaaagtcccaaaaaagcaaatcttgatgtggaggaaaataacccagtt aacgaagaagaaaattctgacgaggatgttctagataatcaaaaagacagtgaagaagaa gaaaagaaaaaagaggctaatgtagagaagcctgcgaaaaagatacataatttttttgct ccaaaaaagaaagaaagtacaaataatactgataaagataagaaaaagtcctccagtcac tcttataaacctagtgcctcgaaatatgacccaataaatgatgcattttggaaacaggga gaaaaggtaccatatattgcgttgacacgtacgttggaattgattgaagatacaagcgct cgattaaaaataatagaaattttatcaaattatttccgatctgtaatagttttaagccca gatgacttacttccaagcatatatttatgtctcaatcaattagcacctgcttatgaaggg attgaattaggggtggcagaaacaaatttgatgaaagctatagcgcaatgtactggtaga acattagctcaaattaaagcagacgtccaaacagttggggatttaggcatcgtggcagaa ggaagtcgttccaatcaaagaactatgtttcaacctgctccactgacagtatcgattgta tatactaggctgaaagagatcgcacaaatgactggttctgcgtctttaactaaaaaattg gataaaattcaatcgctttttgtagcgtgtcgttttactgaagccagatacctcattcgg tccctagccggcaaacttcgaattggtctagcagaacaatctgtgttacaagctttggca ctagcgtgtactatgacaccaccaatacaaagttatccaccggaagttttagacgtgagt aagaaaatgtcaagcgatgcctttaaacaaaagtacgacgaaactgcgcttactcttaaa acaacatattgtgaatgtccaaattatgacaaaataattcctgttttactaaaagagggg attgaagaattaccgaacaaatgtaaaattacacctggcatacctatgaaaccaatgttg gcacatcctactaaaggtgtgcaagaagtattaacgcgtttcgatggattgaaatttact tgtgaatggaagtacgatggagaaagagcgcagattcatttagccgaggatggtaaaatt agtatttacagtaggaatcaagaaaataataccagcaaatatcctgatattataggaaga tttaaaaatactcaaggcgaagaagttaaaagttgtatccttgactgtgaagcagtagcc tgggataacgagaataaacaaatcctacctttccaaatactcagtacaagaaaacgcaag gatgcgaacgaagcagatattaaagttcaagtatgtgtgttcatgtttgatttattgtat ttaaatggagaaccactggtacaacaacctttcataaaacgtcgtgaattattgaaaaag aatttcaaagaagtaattggagaatggaaatttgcaactagtttagatacttcgactatg gaacaagtgcaagatttcttagatgaatcagtcaaaggcaattgcgagggccttatggtg aagaccttagaacaggatgcaacatatgagattgctaagcgttctcggaattggttaaaa ttgaagaaagattatttagaaggtgtgggtgatacattagacgtggttgtcattggtggc tatatagggaaaggaaaaaggacaggaacctatggaggatttcttttagcttgttatgat caagagaatgaggaatatcaaagtgtttgtaagattggtactggattcagcgaagaagac cttcaaaagcacacagagttcttcaaagaacatataataccacaaactaagtcctactat cgttatgactcgtctctcgaacctgatcactggttcgaaccagttcaagtgtgggaaatt aaatgtgcagatctttctttgtcacctgttcataaggcagccgttggtattattgatcca gagaaaggaatatctttgcgatttccacgttttgtccgcattcgcgatgataaaaacaat gaggatgctacctcagcgcaacaagttgcaaatatgtacaacagtcaagagcagataaaa aatcagacatcatcaacaaaagtagctgaagaagacttttattga

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