KEGG   Bombus bifarius (two-form bumblebee): 117211807
Entry
117211807         CDS       T07537                                 
Name
(RefSeq) THO complex subunit 1 isoform X1
  KO
K12878  THO complex subunit 1
Organism
bbif  Bombus bifarius (two-form bumblebee)
Pathway
bbif03013  Nucleocytoplasmic transport
bbif03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bbif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117211807
  09122 Translation
   03013 Nucleocytoplasmic transport
    117211807
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbif03019]
    117211807
   03041 Spliceosome [BR:bbif03041]
    117211807
Messenger RNA biogenesis [BR:bbif03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     117211807
Spliceosome [BR:bbif03041]
 Complex C
  Other components
   EJC/TREX
    117211807
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117211807
SSDB
Motif
Pfam: efThoc1 Death
Other DBs
NCBI-GeneID: 117211807
NCBI-ProteinID: XP_033311924
UniProt: A0A6P8MT15
LinkDB
Position
Unknown
AA seq 664 aa
MAMFEVLRKEYSDYLQQCFKLSDIQIFQKKCVERCTNDSDRKAAIDQALRDTLLVILSEN
LSSNVPLLETYITFCIELCRKDLATASMPVMLLGDIFDSMTLDRCEQLFTFVENNVVVWK
EDLFFSACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNLE
NHTEFGSEKSEGDDLEQITKDDDKSETKVPIDYNLYRKFWALQDFFRNPNQLYLKMHWKI
FSTHASSVLSAFSSFKLEEQRNYPSTCVKVESSMEGSHKETPYFAKYLTNQKLLELQLSD
SNFRRYVLLQFLILFQYLNSTVKFKAFLASGYETSETHELKPDQVEWVKGTTEQVYALLT
ETPPDGPTFAETVKNILKREEHWNAWKNEGCPPFKRPTPDSSADIEESKKPKRPRRRIGD
VIRDAQAVGKYHMGNPELTKLWNLCPNNLEACKSKERDFLPSLETYFEEAIMQLDPNAMV
EDEYKKVNDGNFGWRALRLLARRSPHFFVHGNYPINKLPEYLETMIKKIAKDRPQTQSDI
KLETEETPPPEANDQEFNEDVLKQESEQVEAENTDTKGRKLTKVTPDMVAKLSEILKNDW
KKLATKFGYTSEEITFFQGKPTPYEQCKNMLEIWAEEDVDASMENLAYILEGLKFTEALA
VLKS
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggccatgttcgaagttttaagaaaagaatatagtgattatttgcaacagtgttttaag
ctgtcagatatacaaatatttcaaaagaaatgtgtcgaacggtgtacaaatgatagtgat
agaaaagctgcaattgatcaagcattaagagatactcttcttgtaatattatctgaaaat
ctatcaagcaatgtgcctctgcttgagacttacattacattctgcattgaattatgcaga
aaagacttagcaactgcaagtatgccagtgatgctacttggtgatatatttgattctatg
acactcgacagatgcgaacagttgtttacttttgttgagaacaatgtggttgtgtggaag
gaagatttattctttagtgcctgtaaaaacaatttgttaaggatgtgcaatgacttactt
agaaggttatctagatcacaacaaactgtattttgtggaagaattcttttatttctggct
aagttttttcctttttctgagaggtctggtcttaatattgttagtgaatttaatttggag
aatcatacagaatttggctctgaaaaatcagagggagacgatttggaacaaataactaag
gatgatgataaatcagagactaaagtaccaattgattataatttatatagaaaattttgg
gcactccaagattttttcagaaatcccaatcaattatacctaaaaatgcactggaagata
ttttcaacgcatgcttcaagtgtactgtcagcattttcatcttttaaattggaagaacaa
cgtaattatccttcaacatgtgttaaagttgaatcttccatggagggatctcacaaggaa
accccttattttgcaaaatatttaacaaatcaaaaattgttggagctacaactatctgat
tcaaatttcagacgatatgtattgctgcaatttctcattcttttccaatatcttaatagc
actgttaaatttaaagccttccttgccagtggctatgagacaagtgaaacacatgaacta
aagcctgaccaagtagaatgggtaaaaggaaccacagagcaagtatatgccttactgaca
gaaacacctcccgatggtccaacatttgcagaaactgttaaaaatatattgaaacgcgaa
gagcactggaatgcttggaaaaatgaaggatgcccaccatttaaaagaccaactccagat
tctagcgccgacatagaggaatcaaaaaaaccaaagagaccaaggcgtagaattggagat
gtcattagagacgctcaagcagtaggaaagtaccatatgggaaacccagaactcacgaaa
ttatggaacttatgccccaataatcttgaagcatgtaaatctaaagaaagagacttcctt
ccatctttagagacatattttgaagaagctattatgcaattagatcctaatgcaatggta
gaagatgaatacaagaaagtaaatgatgggaattttggttggcgagcattgagattacta
gctagacgtagtcctcatttttttgtccatgggaattatcctattaataaattacctgaa
tatctcgaaacaatgattaaaaaaatcgctaaagataggccacagacacagtcggatata
aaattagaaacagaggaaactccaccgccagaagcgaacgatcaagaatttaacgaagat
gttctcaagcaagagagtgaacaagttgaagccgaaaatacggatacgaaaggacgaaaa
ttgacgaaagtgacacctgatatggtggcgaaattatcagaaattctgaaaaacgattgg
aaaaagttagcaaccaagtttggttacacgagtgaagagattacattttttcaagggaaa
ccaacgccgtacgagcaatgtaaaaatatgttggaaatttgggcggaagaagatgtagat
gcatcgatggaaaatttagcatatattttagaaggtttaaaattcacggaagcgcttgct
gttttaaaatcctaa

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