Babesia bigemina: BBBOND_0203060
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Entry
BBBOND_0203060 CDS
T08062
Name
(RefSeq) RPAP1-like domain containing protein,putative
KO
K20826
RNA polymerase II-associated protein 1
Organism
bbig
Babesia bigemina
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbig03021
]
BBBOND_0203060
Transcription machinery [BR:
bbig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
BBBOND_0203060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
24563690
NCBI-ProteinID:
XP_012767335
UniProt:
A0A061D8A4
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All DBs
Position
II:complement(710453..714702)
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AA seq
1403 aa
AA seq
DB search
MKGWEYDPEVRGADSDNDFDIIEHFSDDEDAKPSQAAPPTKPSTAQARSTWFPKATHRRL
LGYSLSRSQFTQAEPQAARAGSSHGDIRAPTDKPRQNDHIQGHIDEINRAYGAMGSAHDA
ALPDIASMTEEEIKAEQQFLYEKLGKDMCDFLIQRRLRKMRERNGSTESAGGEGTACSPP
HAISPVVSGGKGSTYEPPKALSTVSFKVDAEELRKLEWTNPVEPDVSGGPIDAGNVRLHQ
LRFDFEGHLLSASGRKDGERHRHESSLYNHGKNPDQPGYTIPELLELMQSTFKPQVQIAT
HTLCNIVRNAHVSSPPYFGFPRERWLRYVTHDANMVGRMGYAVMEHMGTYEVLGSAMRCL
AIMLYGDMDPESFGTQQASPTADSSVVRSNTIWPMQELLAGLHIRDMGVALHRWNPFVAT
FEGASSAYAMYERAKSAGGNRATAGSSANNTSTSGPEDTDTMRSRLSETTDEAESRHGGG
KGAAVKSVRFADQADDTPMGEETRDSRMIGFYLDALNGEFISLEIEDIKHRLAVATGIEE
TDYYTQSNMDDTVYLIVRGVIGRLCNVVSQHEVSLALKSRFITFVCGLLMRLGEPFAQAL
VKCEAFCDLLESFTASLIVGTEQHKKLSEVIGESGADAELRNDRIHLTSAVLCCMRLLSV
FDDRAFATLLDRIGAIALVKQTLTFTYGSQLSQLFNAAANTPPSVKPFSTKLVMPAVMAV
RCLTVWALQNEYNDTLDEIVPVIELEVSTLCRLIQMDGSTLNSFISANGVLLMHIFIHMA
TLLEGEAGKHVNFIWDVGRVHDLLVALCEMGEEKSSIDARLLIASLFQLQSVYMRHCKRN
GSGMKLENVTRSTVVIKSIERYATAISEQFCQQLVKNDVFNLGYRWWSTQIMAGNEQPIV
VAREGNKDVDSYVVPVHIANCMLEALEVLQTEDETLYNSVRANIEPKFKLMMNIIVERIA
LMHKDRTSGTVTFPGDEGIIVQKPIPMLESWSGFILRVVRVIGGYSDQTRGGSAEHVSPT
SVTSENNDDANGDKDKSSTWAAGLFAALTISGCYETIADIWSTLSSVCGPNNDVSIGLGE
QCKHVGESNAISGDGADVVTAFREFNEMVANANTLGDSSMPIMTFIAFVPTFFISAIAGG
TGAAANDTQILLLEALNKRGRFREEFLKWVPPFDVANSLIKAVVSADKNANWNVDRRLLE
ALEVLVFGRLSILDEETSLSGTRAASDVTELHDTIDSIVARMVSMNVRNHNKHLLMASEG
STGSTPAATEHDELSRATVNVINRFNSGSGDSPYVMAVIMLLISAFSRLDSAKRIWADTD
LMVLLGRNLVVDRHTLEIICMHPDGHLSLGNAMVYLPNFNGSEEILRSQRRLLQEFGPSD
LESNNAIMLIAMASLRKYDRLQK
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggctgggagtacgatccagaagtccgtggcgccgatagcgacaacgacttcgat
atcatcgagcacttctctgatgatgaggacgcgaaacctagccaagcggcaccgccaacc
aagccttccactgctcaggcgcgttcaacatggttcccaaaggcaactcatcggcggttg
ttgggttacagtttatctagatcgcaattcactcaagcggagccacaggcggcgcgtgct
gggagctcccacggcgacataagggcccctaccgataaacctcggcaaaatgatcacatc
caagggcatatcgacgagattaatcgtgcatacggagccatgggttcggcccacgacgcc
gcgctccctgatattgccagcatgacggaggaggaaatcaaagcggagcagcagttccta
tacgagaagcttgggaaagacatgtgcgacttcttgatacagcgcaggctgcgaaagatg
agagagcgcaatgggagtaccgaatccgcagggggtgagggtaccgcatgttcaccgccg
cacgccatctcgccagtagtttctggtggaaaagggtccacatacgagccacctaaagcg
ttgtcgacggtgtctttcaaagtggatgcagaggagcttcgcaaactggagtggactaat
ccagtggaaccggatgtaagtggaggacctattgacgctggcaatgtgcggctacaccaa
cttcggttcgactttgagggccacttattgagcgcttcgggtcgtaaagatggcgagaga
catcggcacgagagttccttgtacaaccacgggaagaatcccgaccagcctgggtacacc
atcccggagttgctggagctcatgcagagcacatttaagccccaagtacagattgctacg
cacacgctctgcaacattgttagaaatgcacacgtgtccagccctccgtattttggattc
cctcgcgagcgttggttgaggtacgtaacgcacgatgccaacatggtcgggaggatgggt
tacgcagtgatggagcacatgggaacatatgaagtgctaggaagcgcgatgaggtgcctc
gctatcatgctatatggagatatggatccagaaagctttggcactcaacaagcatcacca
acggcggatagctcggtggtacgctccaacaccatttggcccatgcaggaattgctggct
gggcttcacatcagggatatgggcgttgcccttcaccgatggaatccatttgtggctaca
ttcgagggtgcgtcctcagcgtatgctatgtatgagcgagcaaagtctgcggggggcaac
cgggccacagctggatcgtccgctaacaacacctcaaccagtggaccggaggacactgac
acaatgaggtcgcgtctatccgaaacaacagatgaagcagaatcgcgccatggcggcggc
aaaggcgctgctgtgaagtcggtgcgattcgcagaccaagcggatgatacgccgatgggt
gaggaaacgcgtgacagcagaatgatagggttttaccttgatgccttaaatggtgaattc
ataagtctggagatagaagacatcaagcataggcttgcagtggctacgggtattgaagaa
acggattactacacacagagtaatatggatgacaccgtttacctgattgtgcgcggcgta
atcggtaggctttgcaacgtggtctctcagcacgaggtctccctagcccttaaatcacgc
tttatcacgttcgtttgcggcctgttaatgcgtctgggggagccgtttgcgcaggcactg
gtaaagtgtgaggcattttgcgacctgctggagtcttttacagcatcgctgatcgtcggc
actgagcagcacaaaaaactgtcggaagtgattggagaaagcggcgctgatgccgaatta
cgcaatgatcggatacatctcacttcagctgtgttgtgttgtatgcggctgttatcggtt
ttcgacgacagggctttcgcgacactgctggaccgcattggcgccatagcattggtgaag
cagacactcacgttcacatacggctcgcagttatcacagctgttcaacgccgctgcgaat
acgccgccgtctgttaagcccttctcgacgaaactggtcatgcccgcagtgatggctgta
agatgcctcaccgtctgggctttacaaaacgagtataacgacacgctcgacgagattgtc
ccggttattgagcttgaggtgtcgacgctgtgcaggcttattcaaatggacggttcaacc
ttgaactccttcatcagcgccaatggcgtactcctgatgcacatcttcatacatatggca
accctcctggaaggtgaggcggggaaacacgtcaatttcatatgggacgtcggccgtgtc
catgatctgctggttgcgctctgtgaaatgggcgaagaaaagagcagcattgatgcacgt
ctgctcatcgccagtctttttcagttacaaagcgtatacatgcgccactgtaagcggaac
gggtctggtatgaagttagaaaacgtcaccaggagcactgtggttattaaatccattgaa
aggtacgctacagcgatttcggagcaattttgccaacaactagtgaaaaacgacgtcttt
aacttgggatatagatggtggagcacgcaaataatggcaggcaacgaacagccgattgta
gtcgcacgtgagggtaacaaagatgttgattcgtatgtggttcccgtgcatatcgcgaat
tgcatgctggaagcgttggaggttttgcaaaccgaagatgaaacactatacaacagcgtt
cgcgcgaatatagagccgaagttcaagctcatgatgaatataattgttgaacgaatagcg
ttgatgcacaaagatcgcacttctgggaccgttactttcccaggtgacgaaggtataata
gttcaaaagcccataccgatgttggaatcatggtcaggctttattttgcgcgttgtgcgc
gttattggtgggtacagtgatcagacgcgtgggggcagcgctgagcacgtatcacctaca
agcgtgaccagcgaaaataacgacgacgctaacggtgataaagacaaaagctcaacttgg
gcggcaggcctcttcgcggcactcacgatatctggttgttacgagacaattgcagatatt
tggagcacattgtcctcagtatgcggtccgaacaatgatgtgtcaatcggattgggcgag
caatgcaagcacgtgggggaaagcaatgctatcagtggtgatggtgccgatgtggtgacg
gcattcagggagttcaatgagatggtggccaatgcaaacacgttgggtgactccagcatg
cctattatgacatttatcgcattcgtgccaacgtttttcattagcgccattgccggaggt
accggtgcagcggcgaatgacacgcaaattctattattagaagctctcaataagcgtggg
cgattcagagaagaattcctaaaatgggtgccgcctttcgacgttgcgaatagcctgatc
aaagcagtagtcagtgccgacaaaaacgcaaactggaacgttgataggcgtctgctcgag
gccctggaagtgctagttttcggcaggttgtcgatactcgacgaggagacatctctgtct
ggtacacgggcggctagtgacgtcacggagttgcacgataccattgactccattgtagcc
aggatggtcagtatgaacgttcgcaatcacaataaacacctattgatggcatcggaaggt
tcaaccgggtcgacaccagccgcgaccgagcacgatgagctcagcagggcgacagtaaat
gtcataaacagattcaatagcggttccggggactcaccgtacgtgatggctgtcataatg
ctgctcatttccgcattctcgaggctcgactctgcaaagcgcatatgggctgacaccgac
ctcatggtattgttgggccgtaacttggttgtcgacaggcatactttggaaattatctgc
atgcatccagatggccatttgtcactaggcaacgccatggtatacctcccaaatttcaac
ggaagcgaagaaattctgcgcagccagcggcggctgcttcaagagtttggtcccagtgac
ctggagtctaataatgcaatcatgctgatagcgatggcttcgctccggaaatacgaccgg
ttgcaaaagtaa
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