Babesia bigemina: BBBOND_0303100
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Entry
BBBOND_0303100 CDS
T08062
Name
(RefSeq) DEAD/DEAH box helicase domain containing protein, putative
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
bbig
Babesia bigemina
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbig03019
]
BBBOND_0303100
Enzymes [BR:
bbig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BBBOND_0303100
Messenger RNA biogenesis [BR:
bbig03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
BBBOND_0303100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
24564947
NCBI-ProteinID:
XP_012768592
UniProt:
A0A061D6T2
LinkDB
All DBs
Position
III:762163..768231
Genome browser
AA seq
2022 aa
AA seq
DB search
MADRFDDDIVAGSGAAKYGADGDVVREKAPAAAASTDEHIPAGLSHGERAQGADAISGMD
YGSLGVLNVECVKSLGSDPDVPLKDRIRLWHAMCPTDFLNLLGSSGAKESCCVIHAESLI
VHVVCSAEKEGNVLLDFAKGPQTLQLIYRVERILSQIVRCGGTFELVFFDVFKQLFDPTY
CHAADGEDEEEQAQFFDGYLLLRELLLTHAKLNNIPHFVFRDWYDKDWIDHVNHCDPSCV
LVEEGSSFLYKHRTVYELVDTTTTGELNEQNGEVVEEFQVQQRYIDRFTFAAHALVMHSL
SMNVSVAYLFEIGPFAHNFKAFTSFPSNCTPPPALLEEVEAQFRAEYPYRSVQDGAAQDE
EDAVVPELIEELAGLGVEPRLRQLVACNYLKSFTAMKQEAGDDLDEETALYIDSCLLTFK
VLLLHNYLLDVLPLESRCTRRIDAENWEFFTTYVAATLDLMASTTVPVFNGIAKNLGKMG
DSKRDVADLFDGNLFTSILHCMAVYAKDHGNKVDGAFISLDKDLSASMDKMYGHFSGNLN
DTVFPIDLAPFADVGIYDCLEADSGVSDADNVDTDVLNVDNQFVNMYFGLNAFRDKVKFY
NGDNSNLLTTFAGTNWRDPALVSEKLECIDYFFKVEKPDKFANMPKRTQRQEQRSMQRQT
AFSHLLSRYMGSNNLHHPIVPKLDHPWLDVKQKALEESEQTKDEPTADARAGAKPGKKEK
HGKEAKKEKAPKVKTSAKAELLKQKHTAAQESKGREADMKTLDRYSGRLVSLFSPEHDFD
VIYTNILEHTAGPNRAVDLTDDFKWLKSVINTKAIQLQFVIKMIETLLRTFEGYRMRALN
RRGARASLRRTICITLRLIHDCFKEYKTLIDGPGISLLQRFLIRLGMPVSARNLFEAWLK
IHDDKKNKKFKVESEEAFDYAIPKGMEFEFQVAYMGDLMERTLGSTEDPRVLFKPDAWQK
LLLDAVDARESALVVAPTSTGKTYICYYAMEQGLRLDDEGIVIYVSPNTALAIQVTYEIT
ARFSSKNYTTHSCAAVLSATFLEKFHDPKWNCAQILVTVPAILEQLLISMRTSELGYAKR
IEYIILDEIHCVSDEEIGPFLERIIHLSAAPFLALSATVGNPMQFHSWLSKVETVRMNTK
NAKVHYIYFDERFSDLKLEFYSNKHLVPLNPATCLSYDNVKTSGFPKDLYLMPKDLMVLR
RCTTAVMGNRCPDLDYLDPAVYFSGTPMITKRQYRYWLQTYITEFTRQVQSGVIGEDDFR
NIMDNLKSVNTSVSPADAKAAVDDTTEGIFRLYPSLKPLQPKHSVGSNASDANGDANAES
SSRSQGSALQSSITESRDYLDPAESLALLDTLEQTKRLPCLGFTFDRNHMEHMLISMTQL
LKRRQWEKYYGTPEARAWTNAENKRRMDHYQMLMRQYEAETKMRGASREQKEEQGIGGKV
EEFIELPEEPVDVAEDYDPEFNYYNRKIYVNYTEEVENFIKIAAASISGRKNVDIFIEAM
RRGIGIHHEGLPHKFTMLTETLFRMGFLRVLLSGRSLAFGINVPCKSVVFMGDNHELNPL
MYKQMSGRCGRRGFDLSGHVIFWGIPMKRVRQLLTAQLANLCGYASCSPTESLATLSAFN
SLLVSVRSRPPQQHSKGKISTTDARVRKNEVIARSRDAVVNPRTVVKRLASIFMHPLKPQ
SDFSDDEVLIFRACVETLFKLGFIDSNGLVRGCCELAMLTREAHPTNLFVAHLAQRGKLH
ELAGRGEADSADKLMDIISKFAYKRKQLGTTITLRRLLPQRVRCGDRYTAKLVSNLDVRN
KEGSVGVELLYPDSFPLLPATAGELRKMIDEYNAMVLGVLSKYQAHLKPMEAKLPLSNVD
FRCTSQDAPSWFTERRRGMQFSSLYSPFVAINGIKGRFNTARELWLGTRASSEITLDMVP
TIESFEIDVVQLDPHYNVLKQLAMSLDNSYVIDYWSHGRFSLARDANGLGQYAWFHLRKI
VILLRQMKLTLNAYTNGGTWEDPLQLAVEEALDRYETAFNRI
NT seq
6069 nt
NT seq
+upstream
nt +downstream
nt
atggcggataggtttgacgacgacattgtagccggctccggcgccgccaagtatggtgcg
gacggagatgttgtgcgggagaaagcgcctgccgccgccgcttctactgatgaacacata
ccggcaggtctgtcccacggcgagcgtgcgcagggggcggatgccatcagcggcatggac
tacggctcgctcggtgtgcttaatgtggaatgcgtcaagagcctcggaagcgaccccgac
gtgccgctgaaggacagaatcaggctttggcacgccatgtgtcccactgacttcctcaac
cttttgggcagctctggcgccaaggagagctgctgcgtcatccacgccgagtcgctgatc
gtgcatgtcgtctgcagcgctgagaaggagggcaacgtcctgctggacttcgcgaagggc
ccgcagaccctgcagctcatttaccgcgttgaacgcattttgagccagatcgtgagatgc
ggcgggacgttcgagctggtgttcttcgacgtcttcaagcagctgttcgacccgacctac
tgccatgcagctgatggcgaggatgaggaagagcaagcgcagttcttcgacggctatttg
cttttgcgggagttgctgctgacgcacgcgaaactcaacaacatcccgcacttcgtcttc
cgggattggtacgacaaggactggatcgaccatgtcaaccactgcgacccgtcgtgcgta
ttggtcgaggaggggtcctcgttcctctacaagcatcgcacagtctatgaactggtggac
accacgaccactggggaactcaacgagcagaacggtgaagtcgtggaggagttccaggtc
cagcagcggtacatcgacaggttcacgtttgcggcacacgcgttggtgatgcacagcctg
tctatgaacgtgtcggtcgcttacttgttcgagatcgggccttttgcgcacaacttcaag
gcgttcacctcgttccccagcaactgcactccgccgccagctctgttagaagaggtggag
gcgcagttccgcgccgaatacccatatcgcagcgtacaggatggcgcggcacaggacgag
gaggacgccgttgtgcccgaactcatagaggagctcgctggtctgggcgtggagccgcgg
ctacggcaattggttgcgtgcaactacctgaagagtttcacggcgatgaagcaggaggcg
ggtgatgacttggacgaggagaccgccctgtatatcgacagctgcctgctgacattcaag
gtcctgctgctgcacaactaccttttggacgtgcttccgctggagagcaggtgcacccgc
cgaatcgacgccgaaaattgggagttcttcaccacctacgtcgcggcgaccctggacctc
atggcgtcgaccaccgtgcccgtgttcaacggaatcgcgaagaatctcggcaaaatgggc
gactctaagagggatgtggccgacctgttcgacggcaacctgttcacttccattttgcac
tgcatggctgtgtacgcgaaggaccacggcaacaaggtggatggcgcattcatcagtttg
gataaggacctctctgcgagcatggacaagatgtacgggcacttctccggaaaccttaat
gacaccgttttccctatcgacttggctccattcgccgacgtgggcatttatgactgcctc
gaggccgactctggcgtttccgacgccgataacgtcgacaccgatgtgctcaacgtcgac
aaccagttcgttaacatgtacttcggtttgaacgcattccgagacaaggtcaaattctac
aacggcgacaactccaacctgctcacgacctttgctggcaccaactggagggaccccgcg
ctggtgtcggagaaattggagtgcatagactacttcttcaaagtcgagaagccggacaag
ttcgcgaatatgcctaaacgcacgcaaaggcaggagcagcggagtatgcagcggcagacg
gcgttctctcacttgctgtcgaggtacatgggatctaacaacctgcaccacccgatcgtg
cccaaactcgaccacccgtggttggatgtcaaacagaaggctcttgaggagagcgagcaa
acgaaagacgagccaactgcggatgcacgcgcgggcgctaagcccggcaagaaggagaag
cacggaaaggaggcgaagaaggaaaaggcgcccaaggtgaaaacgtccgccaaagcggaa
ttgttgaagcaaaagcacacggccgcgcaggaaagcaaaggcagggaagccgacatgaag
accctggaccgatattctggtagacttgtttccctgttctctcctgagcacgacttcgac
gttatctacacgaacatcctcgagcacaccgcaggtccgaaccgcgctgtggacctcacg
gatgactttaagtggctcaaaagcgttatcaacaccaaggccatccagttgcagtttgtg
ataaagatgatcgagacgctgttgcgaaccttcgagggttaccgcatgcgtgccctgaac
cgaaggggcgcgagggcgtcgctcaggcgcaccatctgcatcaccttgcggctcatacac
gactgcttcaaggaatacaaaactttgatcgacggtccgggaataagccttttgcagagg
ttccttataaggctcggcatgccggtgagtgcccgcaacctgttcgaggcgtggctcaag
atccacgacgacaagaagaataagaagttcaaagttgaaagcgaggaagcgtttgactat
gcgattccaaagggcatggagttcgagttccaggtcgcgtatatgggcgacctcatggaa
cgcaccctgggctccacggaggaccctagggtgctgttcaaacctgacgcctggcagaaa
ttgctgctggatgccgtcgatgcccgggagtctgcgctggtggtggcgcccacgtccacc
ggtaaaacgtacatctgttactacgccatggaacagggactgaggctggatgacgagggc
atcgtcatctacgtgtcaccgaacactgcgctggccatccaggtcacgtacgaaattacg
gccaggttctcgtcgaagaactacacgacacactcgtgcgccgcggtcctcagcgcgacc
ttcctggagaagttccacgaccccaagtggaactgcgcgcagattctggtgacggttccg
gccatccttgagcagctgctcatttctatgaggaccagcgaactgggttacgccaagcga
atcgagtacataattttggacgaaatccactgtgtgtcggatgaggaaatcgggccgttc
ctcgagcgtatcattcacctcagtgcggccccgttcttggcgctgtctgccactgtgggt
aacccgatgcagttccactcgtggctgtctaaggtggagacggttcgcatgaacactaaa
aatgcgaaggtgcactacatttacttcgacgaacggttttctgacctcaagctggagttc
tactccaataagcacctggtgccgctcaaccccgccacctgcctgtcgtacgacaacgtg
aagaccagcgggttccccaaggacctctacctgatgccgaaggacctgatggtattgcgc
agatgcaccaccgccgtcatgggcaaccggtgccccgaccttgactacctggacccggca
gtctacttcagtggtaccccgatgatcacgaagaggcagtaccggtactggctgcagacc
tacataaccgagttcacgaggcaggtccaaagcggcgtgatcggtgaggatgacttccgt
aacatcatggacaacctgaagtcggtgaacacatcggtgtctccggctgacgcaaaagcc
gcggtcgacgacaccactgaggggattttccgactgtacccctcgttgaagccgctgcag
cccaagcatagcgtaggcagcaatgcgtcagatgccaacggtgacgccaacgcggagtcc
tccagcaggagccaaggatcggcgcttcaatcaagcatcaccgagtcgcgcgactatttg
gacccggctgaatcgctggcgttgcttgacactttggaacagaccaagaggttgccgtgc
ctcggcttcacgtttgaccgtaaccacatggagcacatgctgatatcgatgacgcagctg
ctgaaacgtcggcagtgggagaagtactacggcacccccgaagccagggcgtggaccaac
gccgagaacaagcgtcgcatggaccactaccagatgctgatgcggcagtacgaagccgaa
actaagatgcgtggcgccagccgcgaacaaaaggaggagcagggtatcggcggcaaggtc
gaggagttcatcgagctgcctgaggagccggttgacgtcgctgaggactatgaccccgag
ttcaattattacaatcgcaagatttatgttaactacactgaggaggtggaaaacttcatc
aagatcgcggccgcgtcgatcagcgggaggaagaatgtggacattttcatcgaggccatg
cggcgcggtatcggcatccaccacgagggtctgccgcacaagttcacgatgctgacggaa
acgctgtttaggatgggcttcttgagggtattgctatccggtcgcagtctggcgttcggt
atcaacgtgccttgtaagagtgtcgtcttcatgggcgacaaccatgagctcaacccgctc
atgtacaagcaaatgagtggtcgttgtggtcgtcgtggtttcgatctttcaggccacgtc
attttctggggcattccgatgaaacgtgtacggcagctgttgactgcccaactcgccaat
ctgtgtgggtatgcctcctgcagccccactgagtcgctggcgacgttgtccgccttcaac
agtctgctggtgtccgtcaggtcgaggccgccgcagcagcacagcaagggcaagatatcc
accactgacgcgcgcgttcgcaagaacgaggttatagcaaggagccgtgatgcggttgtg
aacccgcgcaccgtggtgaagcggctggcatcgatattcatgcacccgcttaagcctcaa
tccgacttcagtgacgacgaggttcttatattccgtgcgtgcgtggaaacgttgttcaag
ctcggcttcatagattccaacgggctcgttcgcggctgctgcgagctcgcgatgctcacc
agggaggcccaccccaccaacctattcgttgcgcacctagcgcagaggggcaaactgcac
gagctggctggtaggggtgaagcggattccgccgacaagctcatggatataatctccaaa
ttcgcgtacaaacgtaagcagctcgggactacgatcaccctgaggcggcttcttccgcag
cgggtgcgctgcggtgacaggtacacggcaaagcttgtgtccaaccttgatgtgcgtaac
aaagagggcagcgtgggggtggagctgctttatccagactccttccctctgttgcccgca
accgcaggcgaactccgcaagatgatcgacgagtacaacgccatggtgctgggcgtccta
tcgaagtaccaggcgcacctgaaacccatggaagccaagctgccgctgtccaacgtggac
ttccgttgcacatcgcaggacgcgcccagctggttcactgagaggaggcgtggcatgcag
ttcagcagcctgtattccccgttcgttgctataaacggcatcaagggccgcttcaacacc
gcccgcgagctgtggcttggcactcgcgcgtcatctgaaatcaccctggatatggtgccg
accatcgagtccttcgagatcgacgtcgtgcagctggaccctcactacaacgtgctcaag
cagcttgcgatgtcgctcgacaactcttacgtcattgactactggagtcacggccgcttc
tcactggcgcgtgacgccaacggtctcggccagtacgcgtggttccacctgaggaagatc
gtgatcctgctgaggcagatgaagctgaccctcaacgcctacaccaacggcggtacgtgg
gaagacccgctgcagttggccgtggaggaggccctggatcgctacgagactgccttcaac
cgcatttaa
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integrated database retrieval system
