KEGG   Babesia bigemina: BBBOND_0405180
Entry
BBBOND_0405180    CDS       T08062                                 
Name
(RefSeq) DNA ligase I, putative
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bbig  Babesia bigemina
Pathway
bbig03030  DNA replication
bbig03410  Base excision repair
bbig03420  Nucleotide excision repair
bbig03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bbig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BBBOND_0405180
   03410 Base excision repair
    BBBOND_0405180
   03420 Nucleotide excision repair
    BBBOND_0405180
   03430 Mismatch repair
    BBBOND_0405180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bbig03032]
    BBBOND_0405180
   03400 DNA repair and recombination proteins [BR:bbig03400]
    BBBOND_0405180
Enzymes [BR:bbig01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BBBOND_0405180
    6.5.1.6  DNA ligase (ATP or NAD+)
     BBBOND_0405180
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BBBOND_0405180
DNA replication proteins [BR:bbig03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    BBBOND_0405180
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     BBBOND_0405180
DNA repair and recombination proteins [BR:bbig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BBBOND_0405180
   NER (nucleotide excision repair)
    Other NER factors
     BBBOND_0405180
   MMR (mismatch excision repair)
    Other MMR factors
     BBBOND_0405180
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DUF5644
Other DBs
NCBI-GeneID: 24566575
NCBI-ProteinID: XP_012770220
UniProt: A0A061DE73
LinkDB
Position
V:complement(273546..276318)
AA seq 841 aa
MRCRIAAWLFALIFFVSALSDSCKCFRLSQSSIISGPMNIKQFFAVQPHPARSTPTSPPA
GEQTVPARNDGSSSNEGLNGPGCDITAASPKRRIGAVSDATEEATIDEGLSWSQDDPSES
VGDSAVASQVSECAPAEVGKASKKPKKSPKRKVDADEPAVGTLFNRTMKPGEGCADIRSA
KFDPSLFDISPYIPKYPPSVQQNSLLFIFLAEILQEVDDMFRSGVGSRKCVSTILSNFFR
VLIYHSPSDVIHSVYIMINRIAPEYEGEEIGVGDVLVMKAMAESYGKSEKSIKEMLTKHE
DLGIVASMSSCTSQTIVRLPDLTIEGVIKQFKALAAESGKNSVERKKNGIKRLLACAKKK
EAKYIVRFLQQKLRVGVNSITLFQSIADATYLTKAAKGDQPAIGDVRTAGIKQADTIEEM
EKAVKTATTHLACIETIIGHLLDGDNCQQLLEHCKIRPGIPVSPMLAKPVSKTAEILPAI
GGPGVAFTCEYKYDGERVQLHMMEGRKVRIFSRSMENICEKYPDVIESFLICVKPTVMNC
IIDLEVVAYDPENGKIMPFQQLSTRKRKGVSVKDISIPVCMFPFDILYLNGESLVTKSLS
ERRAALESAVSERKNLLSFACRKDMNSLDEIDDFLRQAVSDSCEGLMIKSLHQDATYEPQ
IRTNNWLKFKKDYIEGMGDSLDLVPIAAFSGTGRRTSVYGSFLLAVYDPVHEVYQSVCRT
GTGFNDQMLTDLHDGLQEHIVAHKPAIYDVPASIEPDVWFLPVRVWECKAADFSLSPIHT
AGQDFTPSKKGIGLRFPRFIRLRHDKAPVDATTSEQLYEMYAKQFNKTLFKEKNTSSSFQ
L
NT seq 2526 nt   +upstreamnt  +downstreamnt
atgcgatgtcgtatcgccgcttggctcttcgctcttatttttttcgtatctgcgctttcc
gattcgtgtaaatgttttagacttagtcagtcgtcgataatttcgggacctatgaatatc
aagcaattctttgcggtgcagccgcatccagctcggagcacgccaacttcgcctcctgca
ggagaacagaccgtgccggcgcgcaatgatgggtcttctagtaacgaggggctcaacgga
cccggttgtgacataactgcagcgtcgcccaagaggcgcattggagccgtttcagatgcc
acggaggaagccacgatcgatgaaggcctttcttggagccaagatgatcccagcgaatca
gtgggtgacagtgcagtggccagccaggtcagtgaatgcgcccctgctgaagttgggaag
gcctctaagaaacccaagaaaagccccaagaggaaggtggacgctgatgaaccggccgtt
ggtacgctgttcaacaggaccatgaagccgggcgagggctgcgccgacataaggtcggcg
aagttcgaccccagcctatttgacataagcccatatatccccaaataccccccttccgtc
cagcagaattctctgttgttcatctttttggctgagatattgcaggaggttgacgacatg
ttcagatcgggcgtgggtagtaggaaatgcgtgtccacgatcttgtcgaacttcttccgc
gtcttaatctaccacagccctagcgacgtcattcacagcgtttacatcatgatcaacaga
attgcgccagagtatgagggcgaggagatcggcgttggcgacgtgctggtgatgaaggca
atggcggaatcctacggcaaaagtgaaaaatctatcaaagaaatgttgaccaagcacgag
gacctaggcatcgttgctagcatgagtagctgcacctcccaaaccatcgtgagactcccc
gacttgaccatagaaggcgtcatcaaacaattcaaggctcttgccgctgaatcagggaag
aattcggttgagcggaaaaagaacgggattaagcgccttttggcatgcgcgaagaagaaa
gaggctaagtacatcgttcggtttttgcagcaaaagttacgcgtcggtgtgaactccatt
acgctattccagtccatcgctgacgccacttatctcacgaaggctgctaagggcgaccaa
ccggcgatcggtgacgtacgtaccgctggcataaagcaggccgataccattgaagaaatg
gagaaggccgtcaaaacggcgacaacgcacctggcctgcatcgaaacaattattggacac
ctgctggacggggacaactgccaacagctgctggagcactgcaaaatacggccagggatt
cccgtgagcccgatgttggcgaagcccgtcagcaagactgcggagatcctgccagccatc
ggcgggccaggagtggcattcacttgcgagtacaagtatgacggtgagcgtgttcagctg
cacatgatggagggccgtaaggtgaggattttcagccgcagcatggaaaacatttgcgag
aaataccccgatgtgatagagagttttctcatctgcgtgaagcccacggtgatgaactgc
ataattgaccttgaagtggtggcttatgacccggaaaacggaaagataatgccctttcag
cagctgtccactcgcaagcgtaagggcgtgtccgtgaaggacatatccatcccggtatgc
atgttcccgtttgacattctctacctgaacggcgagtccctcgtgactaagtctctttca
gaacgccgcgcggcgctcgaatcggcggtgtctgagaggaagaacctactcagtttcgca
tgccgcaaggacatgaactccctggatgagattgacgatttcttgcgccaggcggtctcg
gattcgtgtgaggggctaatgataaaaagtctacaccaggatgcgacgtacgagccgcag
atacgcaccaataactggctcaaattcaagaaggattatattgaaggcatgggggactca
cttgacctcgtgccaatcgcagctttctcagggactggaaggagaacaagcgtttacggg
tcgttcctcctcgcagtctacgaccccgtgcacgaagtgtatcaaagcgtctgcaggact
ggcacaggtttcaacgaccagatgctaacagatctgcacgatggtctgcaggagcacatc
gtcgcccacaagcccgcgatatatgacgtgccggcgagcatcgaacctgacgtgtggttc
ctcccggtgagagtgtgggaatgcaaggccgcggacttctccttgtcgccgattcacacg
gcaggacaggatttcactccgagcaagaagggcattgggttgcgatttccgcgtttcata
cgcttgcgacatgacaaggccccggtcgacgccactaccagcgagcaactgtatgagatg
tacgcgaagcaattcaacaagacgctcttcaaggagaagaatacttcttcaagttttcag
ctctga

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