Bison bison bison (American bison): 104982115
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Entry
104982115 CDS
T08726
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03013
Nucleocytoplasmic transport
bbis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104982115 (UPF3A)
03015 mRNA surveillance pathway
104982115 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbis03019
]
104982115 (UPF3A)
Messenger RNA biogenesis [BR:
bbis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104982115 (UPF3A)
mRNA cycle factors
P-body specific factors
104982115 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
104982115
NCBI-ProteinID:
XP_010829733
Ensembl:
ENSBBBG00000020356
UniProt:
A0A6P3GDJ5
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MRSEDGAGGPGVAVATRGPSGREKPSSAESQFRRESPRREAEAPLASSSSCGSGAGKPRE
EKRTVLSKVVIRRLPPSLTKEQLEQQLHPLPAHDYFEFFTADVSLYPHLYSRAYINFRNP
DDILLFRDRFDGYIFIDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFL
ETYCVEEEKTSVSPETLLGDIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRR
RELEKKRLREEEKRRRREEEKCRRKAAEKQKKTAEKEVRMKLLKKPEKGEEPSTEKPKER
AEETDPGDGKWEPCPSAVVLKPKPPEGSLEELRERSQNDSDKEQRDKERRSREKELEAQQ
CHLDDSRKHRAHHELEKCSGRNGEELARGKGSAADGGRRGSQDRGCPVEAAERPGREKSE
DRPAPRKERMGNKDRPGLQLYQPRARIRACDCDGRHPEEGRDGRRGEAEDSTVALAEKSE
EAVWGDMHVGDVGGGSSPQRSVDSRGRSFRKL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggaggatggagccgggggccccggtgtggccgttgctacgcggggtccgagc
gggagggagaaaccatcatccgcagaaagccagttccgccgggagtctccgcggcgggag
gccgaagcgccgctggcctcctcttccagctgtgggagcggcgcaggcaaacctcgcgag
gaaaagaggacggtcttgagcaaagtggtcatccggcggcttccccccagcctcaccaag
gagcagctggaacagcagctgcacccgctgcctgcacacgattatttcgagttctttact
gctgatgtcagtctttatcctcatctctactcaagagcatacattaactttagaaatcca
gatgacatccttctttttagagatcgttttgatggatatatcttcattgatagtaaaggg
ctagaatatcctgcagtggtagaatttgctccattccagaagatagccaaaaagaagcta
aagaaaaaagatgccaaaaccggaagcattgaagatgacccagagtataagaaattttta
gaaacttactgtgtggaggaggagaaaactagtgtcagtcctgaaactcttctgggagac
atagaggcaaagacacgagaacttattgctagaagaaccacacctctcttggaatatatt
aagaacagaaaattagagaagcagcgaattcgagaagaaaaacgagaggagcggaggagg
agggagctggaaaagaagcgcctacgggaagaagagaagcggaggcggcgggaggaggag
aagtgcaggaggaaagcagcagaaaaacagaagaaaacggcggagaaggaagtaaggatg
aagcttctcaaaaaaccagaaaagggagaggagccgagcactgagaaaccaaaagaaaga
gcggaggagactgaccctggagacgggaagtgggagccctgtcccagtgcggtggtcctg
aagcccaagcccccagagggctcgctggaggagctccgggagaggtcacaaaatgacagt
gataaagagcaaagggataaggagagaagatcccgagaaaaagaacttgaagcacagcaa
tgccacttggatgacagcaggaaacacagagcccaccatgagctggaaaaatgttcggga
agaaatggagaagagctggcacgggggaaggggtctgccgcagacggagggagaagaggg
agccaggataggggctgccctgtggaagcagcagagaggccgggaagggagaagagtgaa
gaccggccggcacccagaaaggagcgcatgggaaacaaggaccggccaggcttgcagctg
taccagcccagagctcgcatccgagcctgtgactgtgatggaagacaccctgaggagggc
cgcgacgggaggaggggtgaggcggaagactcaacggtggctttagctgagaagagcgaa
gaggcggtgtggggcgacatgcatgttggtgacgtgggtgggggctcctcacctcaacgc
tctgtggattcgagagggcgttccttccggaagttataa
DBGET
integrated database retrieval system
