Bifidobacterium bifidum PRL2010: BBPR_0079
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Entry
BBPR_0079 CDS
T01340
Symbol
rmlC
Name
(GenBank) RmlC/RmlD dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
bbp
Bifidobacterium bifidum PRL2010
Pathway
bbp00521
Streptomycin biosynthesis
bbp00523
Polyketide sugar unit biosynthesis
bbp00541
O-Antigen nucleotide sugar biosynthesis
bbp01100
Metabolic pathways
bbp01110
Biosynthesis of secondary metabolites
bbp01250
Biosynthesis of nucleotide sugars
Module
bbp_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
bbp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BBPR_0079 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BBPR_0079 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BBPR_0079 (rmlC)
Enzymes [BR:
bbp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
BBPR_0079 (rmlC)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
BBPR_0079 (rmlC)
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Gene cluster
GFIT
Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
ADP35216
UniProt:
A0A0H3E7R8
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All DBs
Position
complement(90709..92139)
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AA seq
476 aa
AA seq
DB search
MSLEFEKELKVTTTNIPGLLVFDLPVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISF
NAKKGVTRGIHAEPWDKFISIATGEIFGAWVDLRPGDSFGQVFTTRLDPSKAIYVPRGVG
NSFQALQDGTAYTYLVNAHWSLEQKKTYTFVNLADPELNIQWPIPLEDSERSEADLHHPM
LKDAKPMAPKRTMVFGSNGKLGRAIRRYAESHDLRGFEYHDTDTFDIADAEAYAAIDWDL
YGTIINAAAFTAVDEAETTEGRKNAWRTNVQGVKNLARIAAEHRITLVHISSDYVFDGTK
ELHTEDEEFAPLSVYGQTKAAGDALVENVPQHYLLRSSWVIGEGRNFVTRMLGLAQNNAH
AEAPSDQFGRLTFTDDMAKAIFHLLDSNASYGTYNMTGSGRIASWYDIARLVFQTAGVDP
DTITANSVAEYAREHHAAMRPQNCSLDLSKLEATGYHPQNWEQSLTTYLAKELEQR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcattggaatttgaaaaggaactcaaggtcaccacgaccaatattcctggtctgctg
gtatttgacctgccggttcacggagacaaccgtggctggttcaaggaaaactggcagcga
gcaaagatgacagctctgggacttcctgacttcggtcctgtgcagaataacatcagtttc
aatgccaaaaaaggtgtgacacgcggtattcatgctgaaccgtgggacaaatttatctcc
attgcgaccggtgaaattttcggtgcttgggtagacctgcgtcctggcgacagcttcggc
caggttttcaccacccgcttggatcccagcaaggcaatatatgtgccgcgcggagtcggc
aatagcttccaagcgctgcaggacggtaccgcttacacctatctagtcaacgcccattgg
agccttgagcagaagaagacctacacgttcgtcaatctcgcggatccggagctcaacatt
cagtggcccattccactggaggattccgagcgctcggaggcggacctgcatcatccaatg
ctgaaagacgccaaaccaatggcacctaagcgcaccatggtgttcggtagcaacggcaaa
ctgggacgtgcaatccgccgctatgccgaaagccatgacctgcgcggattcgaatatcac
gacaccgatacgttcgatatcgccgatgccgaggcctacgctgccattgattgggatttg
tacggcaccatcatcaatgccgcagcattcacagctgtcgatgaggcggaaacgacggag
ggtcggaagaatgcgtggagaactaatgtccaaggagtaaagaacctcgcccgcatcgct
gccgaacatcgcatcacgctagtgcatatctccagtgattacgtgttcgatggcaccaag
gaactgcataccgaggatgaggaattcgctccacttagtgtatatggacagaccaaggct
gcgggcgacgctctcgtggagaacgtgcctcagcactatctgcttcgttccagctgggtg
attggagagggacgcaacttcgtgacccgtatgctggggttggctcagaacaatgcccac
gctgaagcaccttccgatcagtttggccgtctgacctttactgatgacatggcgaaagct
atcttccacctgcttgacagcaacgcctcctacggtacatacaacatgaccggttccgga
cgcatcgcgagctggtatgacatcgcacgactcgtcttccaaaccgctggagtcgatccc
gataccatcaccgctaactccgtagctgagtatgctcgtgaacaccatgctgccatgcgc
ccgcagaattgctcactggatctcagcaaactggaagctactggataccatccacagaat
tgggagcagtctctcacaacttatctggcaaaggagcttgagcagcgatga
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